Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP13P45452 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
MMP13P45452 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MMP13P45452 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP13P45452 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
MMP13P45452 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
MMP13P45452 AL022342.1-201ENST00000400363 863 ntBASIC17.13■□□□□ 0.33
MMP13P45452 HCG4-201ENST00000418983 998 ntBASIC17.13■□□□□ 0.33
MMP13P45452 AL513480.1-201ENST00000451731 511 ntBASIC17.13■□□□□ 0.33
MMP13P45452 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MMP13P45452 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.13■□□□□ 0.33
MMP13P45452 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP13P45452 AC096734.2-201ENST00000562054 433 ntBASIC17.13■□□□□ 0.33
MMP13P45452 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.13■□□□□ 0.33
MMP13P45452 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.13■□□□□ 0.33
MMP13P45452 AL139011.1-202ENST00000642063 584 ntBASIC17.13■□□□□ 0.33
MMP13P45452 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MMP13P45452 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.13■□□□□ 0.33
MMP13P45452 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MMP13P45452 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP13P45452 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
MMP13P45452 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MMP13P45452 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MMP13P45452 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP13P45452 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.12■□□□□ 0.33
MMP13P45452 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MMP13P45452 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
MMP13P45452 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP13P45452 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP13P45452 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.12■□□□□ 0.33
MMP13P45452 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.12■□□□□ 0.33
MMP13P45452 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.12■□□□□ 0.33
MMP13P45452 AC087641.1-201ENST00000557561 1021 ntBASIC17.12■□□□□ 0.33
MMP13P45452 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP13P45452 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP13P45452 AC027601.4-201ENST00000611259 610 ntBASIC17.12■□□□□ 0.33
MMP13P45452 AP001350.2-201ENST00000625104 1094 ntBASIC17.12■□□□□ 0.33
MMP13P45452 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.12■□□□□ 0.33
MMP13P45452 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MMP13P45452 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP13P45452 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP13P45452 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.11■□□□□ 0.33
MMP13P45452 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.11■□□□□ 0.33
MMP13P45452 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
MMP13P45452 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.11■□□□□ 0.33
MMP13P45452 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP13P45452 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
MMP13P45452 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms