Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTTP42858 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.12■□□□□ 0.49
HTTP42858 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HTTP42858 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.12■□□□□ 0.49
HTTP42858 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.11■□□□□ 0.49
HTTP42858 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
HTTP42858 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.11■□□□□ 0.49
HTTP42858 AC012441.1-201ENST00000446669 685 ntBASIC18.11■□□□□ 0.49
HTTP42858 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HTTP42858 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HTTP42858 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.11■□□□□ 0.49
HTTP42858 AL096828.3-201ENST00000615354 462 ntBASIC18.11■□□□□ 0.49
HTTP42858 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HTTP42858 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
HTTP42858 AC007613.1-201ENST00000572811 2597 ntBASIC18.11■□□□□ 0.49
HTTP42858 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.11■□□□□ 0.49
HTTP42858 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HTTP42858 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HTTP42858 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HTTP42858 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HTTP42858 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HTTP42858 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HTTP42858 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HTTP42858 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.11■□□□□ 0.49
HTTP42858 AL139010.1-201ENST00000454878 894 ntBASIC18.11■□□□□ 0.49
HTTP42858 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC18.11■□□□□ 0.49
HTTP42858 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.11■□□□□ 0.49
HTTP42858 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HTTP42858 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HTTP42858 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.11■□□□□ 0.49
HTTP42858 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
HTTP42858 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HTTP42858 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.11■□□□□ 0.49
HTTP42858 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HTTP42858 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HTTP42858 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HTTP42858 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HTTP42858 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HTTP42858 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.1■□□□□ 0.49
HTTP42858 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HTTP42858 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HTTP42858 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.1■□□□□ 0.49
HTTP42858 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.1■□□□□ 0.49
HTTP42858 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.1■□□□□ 0.49
HTTP42858 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC18.1■□□□□ 0.49
HTTP42858 RHOXF1P1-202ENST00000635473 501 ntBASIC18.1■□□□□ 0.49
HTTP42858 REXO1L8P-201ENST00000604378 1897 ntBASIC18.1■□□□□ 0.49
HTTP42858 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.1■□□□□ 0.49
HTTP42858 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HTTP42858 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HTTP42858 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HTTP42858 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HTTP42858 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HTTP42858 TARDBPP1-201ENST00000442013 1203 ntBASIC18.1■□□□□ 0.49
HTTP42858 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
HTTP42858 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.1■□□□□ 0.49
HTTP42858 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC18.1■□□□□ 0.49
HTTP42858 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.1■□□□□ 0.49
HTTP42858 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.1■□□□□ 0.49
HTTP42858 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HTTP42858 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HTTP42858 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HTTP42858 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HTTP42858 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
HTTP42858 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HTTP42858 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HTTP42858 MTX1P1-201ENST00000440904 838 ntBASIC18.09■□□□□ 0.49
HTTP42858 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTTP42858 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HTTP42858 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.09■□□□□ 0.49
HTTP42858 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.09■□□□□ 0.49
HTTP42858 AC018635.2-201ENST00000608625 364 ntBASIC18.09■□□□□ 0.49
HTTP42858 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.09■□□□□ 0.49
HTTP42858 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.09■□□□□ 0.49
HTTP42858 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.09■□□□□ 0.49
HTTP42858 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTTP42858 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HTTP42858 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTTP42858 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HTTP42858 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HTTP42858 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HTTP42858 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.09■□□□□ 0.49
HTTP42858 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.09■□□□□ 0.49
HTTP42858 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
HTTP42858 AC104784.1-201ENST00000473096 294 ntBASIC18.09■□□□□ 0.49
HTTP42858 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HTTP42858 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.09■□□□□ 0.49
HTTP42858 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC18.09■□□□□ 0.49
HTTP42858 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTTP42858 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.09■□□□□ 0.49
HTTP42858 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.09■□□□□ 0.49
HTTP42858 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTTP42858 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HTTP42858 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC18.09■□□□□ 0.49
HTTP42858 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTTP42858 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTTP42858 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTTP42858 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HTTP42858 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HTTP42858 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms