Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.62■□□□□ 0.89
COL15A1P39059 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
COL15A1P39059 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL15A1P39059 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
COL15A1P39059 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL15A1P39059 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL15A1P39059 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
COL15A1P39059 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.62■□□□□ 0.89
COL15A1P39059 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL15A1P39059 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL15A1P39059 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL15A1P39059 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL15A1P39059 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL15A1P39059 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL15A1P39059 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL15A1P39059 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
COL15A1P39059 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
COL15A1P39059 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC20.61■□□□□ 0.89
COL15A1P39059 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.61■□□□□ 0.89
COL15A1P39059 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.61■□□□□ 0.89
COL15A1P39059 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.61■□□□□ 0.89
COL15A1P39059 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL15A1P39059 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL15A1P39059 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL15A1P39059 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.61■□□□□ 0.89
COL15A1P39059 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.61■□□□□ 0.89
COL15A1P39059 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL15A1P39059 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.61■□□□□ 0.89
COL15A1P39059 RNF216P1-203ENST00000404404 2427 ntBASIC20.61■□□□□ 0.89
COL15A1P39059 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.61■□□□□ 0.89
COL15A1P39059 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL15A1P39059 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL15A1P39059 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
COL15A1P39059 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL15A1P39059 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL15A1P39059 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL15A1P39059 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL15A1P39059 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.6■□□□□ 0.89
COL15A1P39059 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.6■□□□□ 0.89
COL15A1P39059 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL15A1P39059 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL15A1P39059 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
COL15A1P39059 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.6■□□□□ 0.89
COL15A1P39059 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.6■□□□□ 0.89
COL15A1P39059 RRP7BP-205ENST00000566851 833 ntBASIC20.6■□□□□ 0.89
COL15A1P39059 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.6■□□□□ 0.89
COL15A1P39059 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC20.6■□□□□ 0.89
COL15A1P39059 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL15A1P39059 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.6■□□□□ 0.89
COL15A1P39059 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
COL15A1P39059 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.6■□□□□ 0.89
COL15A1P39059 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL15A1P39059 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL15A1P39059 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL15A1P39059 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
COL15A1P39059 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.6■□□□□ 0.89
COL15A1P39059 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
COL15A1P39059 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL15A1P39059 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL15A1P39059 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL15A1P39059 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
COL15A1P39059 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL15A1P39059 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL15A1P39059 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
COL15A1P39059 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL15A1P39059 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL15A1P39059 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
COL15A1P39059 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.59■□□□□ 0.89
COL15A1P39059 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.59■□□□□ 0.89
COL15A1P39059 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
COL15A1P39059 SNX29P1-201ENST00000548357 1007 ntBASIC20.59■□□□□ 0.89
COL15A1P39059 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.59■□□□□ 0.89
COL15A1P39059 MIR4259-201ENST00000584466 101 ntBASIC20.59■□□□□ 0.89
COL15A1P39059 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.59■□□□□ 0.89
COL15A1P39059 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
COL15A1P39059 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
COL15A1P39059 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 AC020763.4-201ENST00000623414 4170 ntBASIC20.59■□□□□ 0.89
COL15A1P39059 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
COL15A1P39059 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
COL15A1P39059 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 PCDHA12-202ENST00000613593 2588 ntBASIC20.59■□□□□ 0.89
COL15A1P39059 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms