Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.68■□□□□ 0.26
RPA3P35244 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPA3P35244 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RPA3P35244 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.68■□□□□ 0.26
RPA3P35244 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPA3P35244 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPA3P35244 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPA3P35244 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.68■□□□□ 0.26
RPA3P35244 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RPA3P35244 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPA3P35244 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPA3P35244 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPA3P35244 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.67■□□□□ 0.26
RPA3P35244 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPA3P35244 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.67■□□□□ 0.26
RPA3P35244 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RPA3P35244 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPA3P35244 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.67■□□□□ 0.26
RPA3P35244 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.67■□□□□ 0.26
RPA3P35244 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPA3P35244 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RPA3P35244 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPA3P35244 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPA3P35244 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPA3P35244 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RPA3P35244 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.67■□□□□ 0.26
RPA3P35244 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPA3P35244 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPA3P35244 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPA3P35244 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.67■□□□□ 0.26
RPA3P35244 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.67■□□□□ 0.26
RPA3P35244 AC018712.1-201ENST00000455767 687 ntBASIC16.67■□□□□ 0.26
RPA3P35244 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.67■□□□□ 0.26
RPA3P35244 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RPA3P35244 AC006557.2-201ENST00000592985 1240 ntBASIC16.67■□□□□ 0.26
RPA3P35244 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPA3P35244 AL773604.1-201ENST00000617417 272 ntBASIC16.67■□□□□ 0.26
RPA3P35244 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.67■□□□□ 0.26
RPA3P35244 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPA3P35244 AC112504.1-201ENST00000623415 1841 ntBASIC16.67■□□□□ 0.26
RPA3P35244 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPA3P35244 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPA3P35244 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.67■□□□□ 0.26
RPA3P35244 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPA3P35244 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
RPA3P35244 AC022532.1-201ENST00000624563 1728 ntBASIC16.67■□□□□ 0.26
RPA3P35244 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RPA3P35244 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RPA3P35244 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
RPA3P35244 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
RPA3P35244 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.67■□□□□ 0.26
RPA3P35244 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPA3P35244 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.66■□□□□ 0.26
RPA3P35244 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPA3P35244 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPA3P35244 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPA3P35244 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.66■□□□□ 0.26
RPA3P35244 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPA3P35244 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPA3P35244 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPA3P35244 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RPA3P35244 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPA3P35244 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPA3P35244 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.66■□□□□ 0.26
RPA3P35244 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RPA3P35244 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.66■□□□□ 0.26
RPA3P35244 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPA3P35244 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RPA3P35244 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPA3P35244 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPA3P35244 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.66■□□□□ 0.26
RPA3P35244 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.66■□□□□ 0.26
RPA3P35244 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RPA3P35244 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.66■□□□□ 0.26
RPA3P35244 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPA3P35244 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPA3P35244 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
RPA3P35244 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.66■□□□□ 0.26
RPA3P35244 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.66■□□□□ 0.26
RPA3P35244 CDC14C-201ENST00000428251 1719 ntBASIC16.66■□□□□ 0.26
RPA3P35244 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPA3P35244 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.66■□□□□ 0.26
RPA3P35244 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.66■□□□□ 0.26
RPA3P35244 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
RPA3P35244 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPA3P35244 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.66■□□□□ 0.26
RPA3P35244 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.66■□□□□ 0.26
RPA3P35244 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RPA3P35244 AL662844.1-201ENST00000546340 181 ntBASIC16.66■□□□□ 0.26
RPA3P35244 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
RPA3P35244 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.66■□□□□ 0.26
RPA3P35244 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RPA3P35244 AL353135.1-201ENST00000606729 504 ntBASIC16.66■□□□□ 0.26
RPA3P35244 AL139424.1-201ENST00000607572 797 ntBASIC16.66■□□□□ 0.26
RPA3P35244 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.66■□□□□ 0.26
RPA3P35244 AC148477.8-201ENST00000624298 468 ntBASIC16.66■□□□□ 0.26
RPA3P35244 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPA3P35244 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RPA3P35244 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPA3P35244 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms