Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CD40P25942 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CD40P25942 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.15
CD40P25942 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40P25942 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CD40P25942 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40P25942 AC020916.1-201ENST00000587762 1774 ntBASIC14.14□□□□□ -0.15
CD40P25942 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CD40P25942 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40P25942 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD40P25942 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CD40P25942 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.14□□□□□ -0.15
CD40P25942 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD40P25942 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD40P25942 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CD40P25942 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CD40P25942 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.14□□□□□ -0.15
CD40P25942 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD40P25942 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD40P25942 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.14□□□□□ -0.15
CD40P25942 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.14□□□□□ -0.15
CD40P25942 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD40P25942 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.14□□□□□ -0.15
CD40P25942 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40P25942 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD40P25942 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40P25942 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40P25942 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CD40P25942 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CD40P25942 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CD40P25942 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40P25942 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.14□□□□□ -0.15
CD40P25942 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40P25942 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.14□□□□□ -0.15
CD40P25942 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40P25942 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40P25942 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40P25942 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.13□□□□□ -0.15
CD40P25942 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD40P25942 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD40P25942 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.13□□□□□ -0.15
CD40P25942 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40P25942 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.13□□□□□ -0.15
CD40P25942 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40P25942 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.13□□□□□ -0.15
CD40P25942 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD40P25942 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
CD40P25942 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40P25942 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD40P25942 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.13□□□□□ -0.15
CD40P25942 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40P25942 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40P25942 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40P25942 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.13□□□□□ -0.15
CD40P25942 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CD40P25942 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.13□□□□□ -0.15
CD40P25942 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.13□□□□□ -0.15
CD40P25942 AC092580.3-201ENST00000430932 139 ntBASIC14.13□□□□□ -0.15
CD40P25942 AL512638.1-201ENST00000457493 794 ntBASIC14.13□□□□□ -0.15
CD40P25942 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD40P25942 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.13□□□□□ -0.15
CD40P25942 AC027369.6-201ENST00000525520 931 ntBASIC14.13□□□□□ -0.15
CD40P25942 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40P25942 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.13□□□□□ -0.15
CD40P25942 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.13□□□□□ -0.15
CD40P25942 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.13□□□□□ -0.15
CD40P25942 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.13□□□□□ -0.15
CD40P25942 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.13□□□□□ -0.15
CD40P25942 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40P25942 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.13□□□□□ -0.15
CD40P25942 LINC02084-201ENST00000606069 1096 ntBASIC14.13□□□□□ -0.15
CD40P25942 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD40P25942 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40P25942 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40P25942 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.13□□□□□ -0.15
CD40P25942 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.13□□□□□ -0.15
CD40P25942 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40P25942 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CD40P25942 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.13□□□□□ -0.15
CD40P25942 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.13□□□□□ -0.15
CD40P25942 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.13□□□□□ -0.15
CD40P25942 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
CD40P25942 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CD40P25942 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD40P25942 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD40P25942 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.12□□□□□ -0.15
CD40P25942 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.12□□□□□ -0.15
CD40P25942 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.12□□□□□ -0.15
CD40P25942 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.12□□□□□ -0.15
CD40P25942 UBALD1-205ENST00000590891 2641 ntBASIC14.12□□□□□ -0.15
CD40P25942 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.12□□□□□ -0.15
CD40P25942 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms