Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
RAB4AP20338 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 LINC00552-201ENST00000625151 2579 ntBASIC12.69□□□□□ -0.38
RAB4AP20338 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB4AP20338 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
RAB4AP20338 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 CES1P1-201ENST00000421606 1704 ntBASIC12.68□□□□□ -0.38
RAB4AP20338 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.68□□□□□ -0.38
RAB4AP20338 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.68□□□□□ -0.38
RAB4AP20338 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
RAB4AP20338 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RAB4AP20338 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
RAB4AP20338 SLC25A1P3-201ENST00000395415 828 ntBASIC12.68□□□□□ -0.38
RAB4AP20338 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.68□□□□□ -0.38
RAB4AP20338 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB4AP20338 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB4AP20338 AC113404.2-201ENST00000507884 177 ntBASIC12.68□□□□□ -0.38
RAB4AP20338 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB4AP20338 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 GRAMD4P8-201ENST00000605465 1115 ntBASIC12.68□□□□□ -0.38
RAB4AP20338 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC12.68□□□□□ -0.38
RAB4AP20338 AC073648.6-201ENST00000641589 218 ntBASIC12.68□□□□□ -0.38
RAB4AP20338 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
RAB4AP20338 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
RAB4AP20338 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RAB4AP20338 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB4AP20338 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
RAB4AP20338 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB4AP20338 HSPA7-201ENST00000445535 1927 ntBASIC12.68□□□□□ -0.38
RAB4AP20338 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
RAB4AP20338 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RAB4AP20338 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.68□□□□□ -0.38
RAB4AP20338 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
RAB4AP20338 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RAB4AP20338 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB4AP20338 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB4AP20338 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB4AP20338 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC12.67□□□□□ -0.38
RAB4AP20338 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
RAB4AP20338 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB4AP20338 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
RAB4AP20338 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.67□□□□□ -0.38
RAB4AP20338 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB4AP20338 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC12.67□□□□□ -0.38
RAB4AP20338 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB4AP20338 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RAB4AP20338 SLC25A1P2-201ENST00000430693 912 ntBASIC12.67□□□□□ -0.38
RAB4AP20338 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB4AP20338 NUDT16P1-203ENST00000513809 620 ntBASIC12.67□□□□□ -0.38
RAB4AP20338 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.67□□□□□ -0.38
RAB4AP20338 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
RAB4AP20338 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
RAB4AP20338 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB4AP20338 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms