Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.47□□□□□ -0.09
RAB3BP20337 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
RAB3BP20337 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3BP20337 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3BP20337 AC083849.1-201ENST00000615227 514 ntBASIC14.47□□□□□ -0.09
RAB3BP20337 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3BP20337 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3BP20337 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3BP20337 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3BP20337 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RAB3BP20337 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3BP20337 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB3BP20337 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3BP20337 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3BP20337 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3BP20337 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
RAB3BP20337 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3BP20337 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3BP20337 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3BP20337 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3BP20337 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3BP20337 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3BP20337 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.47□□□□□ -0.09
RAB3BP20337 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB3BP20337 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB3BP20337 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
RAB3BP20337 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 AC016027.1-202ENST00000607927 1699 ntBASIC14.46□□□□□ -0.09
RAB3BP20337 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
RAB3BP20337 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RAB3BP20337 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
RAB3BP20337 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 C8orf49-201ENST00000525043 1968 ntBASIC14.46□□□□□ -0.09
RAB3BP20337 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RAB3BP20337 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 AC113347.1-201ENST00000413321 391 ntBASIC14.46□□□□□ -0.09
RAB3BP20337 AC087499.1-201ENST00000418141 1075 ntBASIC14.46□□□□□ -0.09
RAB3BP20337 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB3BP20337 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB3BP20337 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.46□□□□□ -0.09
RAB3BP20337 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.46□□□□□ -0.09
RAB3BP20337 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.46□□□□□ -0.09
RAB3BP20337 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.46□□□□□ -0.09
RAB3BP20337 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RAB3BP20337 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.46□□□□□ -0.09
RAB3BP20337 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RAB3BP20337 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.46□□□□□ -0.09
RAB3BP20337 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB3BP20337 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3BP20337 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.46□□□□□ -0.1
RAB3BP20337 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3BP20337 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3BP20337 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.46□□□□□ -0.1
RAB3BP20337 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3BP20337 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.46□□□□□ -0.1
RAB3BP20337 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3BP20337 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.46□□□□□ -0.1
RAB3BP20337 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.46□□□□□ -0.1
RAB3BP20337 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.46□□□□□ -0.1
RAB3BP20337 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3BP20337 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.46□□□□□ -0.1
RAB3BP20337 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3BP20337 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB3BP20337 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB3BP20337 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB3BP20337 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RAB3BP20337 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB3BP20337 AL590787.1-201ENST00000568856 1315 ntBASIC14.45□□□□□ -0.1
RAB3BP20337 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RAB3BP20337 INTS4P1-201ENST00000438455 1935 ntBASIC14.45□□□□□ -0.1
RAB3BP20337 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3BP20337 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms