Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 AC007064.4-201ENST00000637740 555 ntBASIC19■□□□□ 0.63
ATP2B1P20020 AL645728.2-201ENST00000641974 660 ntBASIC19■□□□□ 0.63
ATP2B1P20020 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B1P20020 GPAA1P2-202ENST00000606848 1787 ntBASIC19■□□□□ 0.63
ATP2B1P20020 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP2B1P20020 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP2B1P20020 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19■□□□□ 0.63
ATP2B1P20020 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B1P20020 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B1P20020 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B1P20020 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B1P20020 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B1P20020 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19■□□□□ 0.63
ATP2B1P20020 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19■□□□□ 0.63
ATP2B1P20020 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP2B1P20020 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP2B1P20020 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19■□□□□ 0.63
ATP2B1P20020 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B1P20020 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
ATP2B1P20020 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.99■□□□□ 0.63
ATP2B1P20020 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.99■□□□□ 0.63
ATP2B1P20020 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 RNU1-129P-201ENST00000384064 167 ntBASIC18.99■□□□□ 0.63
ATP2B1P20020 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.99■□□□□ 0.63
ATP2B1P20020 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.99■□□□□ 0.63
ATP2B1P20020 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 U1.21-201ENST00000580816 167 ntBASIC18.99■□□□□ 0.63
ATP2B1P20020 AL031055.1-201ENST00000606362 631 ntBASIC18.99■□□□□ 0.63
ATP2B1P20020 AC027601.4-201ENST00000611259 610 ntBASIC18.99■□□□□ 0.63
ATP2B1P20020 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.99■□□□□ 0.63
ATP2B1P20020 AC092865.6-201ENST00000642101 219 ntBASIC18.99■□□□□ 0.63
ATP2B1P20020 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ATP2B1P20020 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.99■□□□□ 0.63
ATP2B1P20020 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ATP2B1P20020 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2B1P20020 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ATP2B1P20020 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2B1P20020 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.98■□□□□ 0.63
ATP2B1P20020 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2B1P20020 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
ATP2B1P20020 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2B1P20020 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2B1P20020 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
ATP2B1P20020 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2B1P20020 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2B1P20020 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2B1P20020 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2B1P20020 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
ATP2B1P20020 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ATP2B1P20020 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ATP2B1P20020 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
ATP2B1P20020 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2B1P20020 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ATP2B1P20020 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.98■□□□□ 0.63
ATP2B1P20020 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2B1P20020 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2B1P20020 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.98■□□□□ 0.63
ATP2B1P20020 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2B1P20020 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
ATP2B1P20020 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2B1P20020 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
ATP2B1P20020 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2B1P20020 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2B1P20020 MIR574-201ENST00000385209 96 ntBASIC18.98■□□□□ 0.63
ATP2B1P20020 AC023274.1-201ENST00000418278 595 ntBASIC18.98■□□□□ 0.63
ATP2B1P20020 RNA5SP416-201ENST00000516838 111 ntBASIC18.98■□□□□ 0.63
ATP2B1P20020 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.98■□□□□ 0.63
ATP2B1P20020 KRT19P2-202ENST00000557173 1012 ntBASIC18.98■□□□□ 0.63
ATP2B1P20020 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.98■□□□□ 0.63
ATP2B1P20020 AC092919.2-201ENST00000623631 1645 ntBASIC18.98■□□□□ 0.63
ATP2B1P20020 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.98■□□□□ 0.63
ATP2B1P20020 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2B1P20020 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2B1P20020 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ATP2B1P20020 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2B1P20020 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
ATP2B1P20020 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
ATP2B1P20020 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2B1P20020 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms