Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCL3P19876 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CXCL3P19876 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.84□□□□□ -0.19
CXCL3P19876 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCL3P19876 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCL3P19876 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCL3P19876 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.84□□□□□ -0.19
CXCL3P19876 AC111152.3-201ENST00000569699 673 ntBASIC13.84□□□□□ -0.19
CXCL3P19876 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL3P19876 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCL3P19876 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL3P19876 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCL3P19876 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCL3P19876 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL3P19876 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL3P19876 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL3P19876 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CXCL3P19876 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CXCL3P19876 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL3P19876 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL3P19876 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL3P19876 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL3P19876 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL3P19876 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCL3P19876 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
CXCL3P19876 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CXCL3P19876 AC009336.1-201ENST00000608941 1553 ntBASIC13.83□□□□□ -0.19
CXCL3P19876 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
CXCL3P19876 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.83□□□□□ -0.19
CXCL3P19876 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CXCL3P19876 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CXCL3P19876 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.83□□□□□ -0.19
CXCL3P19876 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL3P19876 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL3P19876 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCL3P19876 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCL3P19876 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL3P19876 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.83□□□□□ -0.2
CXCL3P19876 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL3P19876 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL3P19876 UNC93B2-201ENST00000285383 730 ntBASIC13.83□□□□□ -0.2
CXCL3P19876 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL3P19876 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CXCL3P19876 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL3P19876 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL3P19876 MIR648-201ENST00000385046 94 ntBASIC13.83□□□□□ -0.2
CXCL3P19876 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCL3P19876 AC007967.3-201ENST00000434308 558 ntBASIC13.83□□□□□ -0.2
CXCL3P19876 AC007663.1-201ENST00000438948 1240 ntBASIC13.83□□□□□ -0.2
CXCL3P19876 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.83□□□□□ -0.2
CXCL3P19876 AC009947.2-201ENST00000444014 672 ntBASIC13.83□□□□□ -0.2
CXCL3P19876 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCL3P19876 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL3P19876 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL3P19876 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCL3P19876 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.83□□□□□ -0.2
CXCL3P19876 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCL3P19876 Z99916.2-201ENST00000604037 246 ntBASIC13.83□□□□□ -0.2
CXCL3P19876 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.83□□□□□ -0.2
CXCL3P19876 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL3P19876 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCL3P19876 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCL3P19876 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCL3P19876 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.83□□□□□ -0.2
CXCL3P19876 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCL3P19876 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.83□□□□□ -0.2
CXCL3P19876 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL3P19876 AC005252.3-201ENST00000623855 2258 ntBASIC13.83□□□□□ -0.2
CXCL3P19876 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL3P19876 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
CXCL3P19876 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.82□□□□□ -0.2
CXCL3P19876 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CXCL3P19876 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL3P19876 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL3P19876 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CXCL3P19876 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL3P19876 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL3P19876 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CXCL3P19876 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL3P19876 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CXCL3P19876 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.82□□□□□ -0.2
CXCL3P19876 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL3P19876 POU5F1P6-201ENST00000466990 990 ntBASIC13.82□□□□□ -0.2
CXCL3P19876 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.82□□□□□ -0.2
CXCL3P19876 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms