Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ERCC3P19447 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.01■□□□□ 0.63
ERCC3P19447 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
ERCC3P19447 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ERCC3P19447 HLA-H-201ENST00000383620 1096 ntBASIC19.01■□□□□ 0.63
ERCC3P19447 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
ERCC3P19447 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ERCC3P19447 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.01■□□□□ 0.63
ERCC3P19447 PIN1P1-201ENST00000412108 996 ntBASIC19.01■□□□□ 0.63
ERCC3P19447 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.01■□□□□ 0.63
ERCC3P19447 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.01■□□□□ 0.63
ERCC3P19447 HLA-V-204ENST00000476601 1289 ntBASIC19.01■□□□□ 0.63
ERCC3P19447 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.01■□□□□ 0.63
ERCC3P19447 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.01■□□□□ 0.63
ERCC3P19447 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.01■□□□□ 0.63
ERCC3P19447 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.01■□□□□ 0.63
ERCC3P19447 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ERCC3P19447 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ERCC3P19447 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ERCC3P19447 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.01■□□□□ 0.63
ERCC3P19447 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.01■□□□□ 0.63
ERCC3P19447 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ERCC3P19447 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.01■□□□□ 0.63
ERCC3P19447 AL671710.1-201ENST00000610245 2349 ntBASIC19.01■□□□□ 0.63
ERCC3P19447 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.01■□□□□ 0.63
ERCC3P19447 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
ERCC3P19447 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ERCC3P19447 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.01■□□□□ 0.63
ERCC3P19447 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ERCC3P19447 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ERCC3P19447 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19■□□□□ 0.63
ERCC3P19447 AC092068.3-201ENST00000587894 2016 ntBASIC19■□□□□ 0.63
ERCC3P19447 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
ERCC3P19447 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
ERCC3P19447 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ERCC3P19447 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19■□□□□ 0.63
ERCC3P19447 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
ERCC3P19447 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
ERCC3P19447 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19■□□□□ 0.63
ERCC3P19447 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19■□□□□ 0.63
ERCC3P19447 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19■□□□□ 0.63
ERCC3P19447 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19■□□□□ 0.63
ERCC3P19447 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19■□□□□ 0.63
ERCC3P19447 SIGLEC29P-201ENST00000599873 1114 ntBASIC19■□□□□ 0.63
ERCC3P19447 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
ERCC3P19447 AL662799.1-202ENST00000614205 422 ntBASIC19■□□□□ 0.63
ERCC3P19447 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ERCC3P19447 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ERCC3P19447 AC073439.1-201ENST00000624121 1774 ntBASIC19■□□□□ 0.63
ERCC3P19447 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19■□□□□ 0.63
ERCC3P19447 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19■□□□□ 0.63
ERCC3P19447 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
ERCC3P19447 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ERCC3P19447 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19■□□□□ 0.63
ERCC3P19447 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ERCC3P19447 AC005915.1-201ENST00000624912 2018 ntBASIC19■□□□□ 0.63
ERCC3P19447 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.99■□□□□ 0.63
ERCC3P19447 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
ERCC3P19447 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
ERCC3P19447 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.99■□□□□ 0.63
ERCC3P19447 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
ERCC3P19447 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
ERCC3P19447 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.99■□□□□ 0.63
ERCC3P19447 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.99■□□□□ 0.63
ERCC3P19447 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.99■□□□□ 0.63
ERCC3P19447 AC124947.2-201ENST00000547118 1133 ntBASIC18.99■□□□□ 0.63
ERCC3P19447 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.99■□□□□ 0.63
ERCC3P19447 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.99■□□□□ 0.63
ERCC3P19447 SPDYE22P-201ENST00000582158 798 ntBASIC18.99■□□□□ 0.63
ERCC3P19447 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.99■□□□□ 0.63
ERCC3P19447 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ERCC3P19447 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ERCC3P19447 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.99■□□□□ 0.63
ERCC3P19447 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ERCC3P19447 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ERCC3P19447 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms