Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.67■□□□□ 0.42
CD58P19256 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.67■□□□□ 0.42
CD58P19256 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD58P19256 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CD58P19256 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CD58P19256 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.66■□□□□ 0.42
CD58P19256 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.66■□□□□ 0.42
CD58P19256 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.66■□□□□ 0.42
CD58P19256 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CD58P19256 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CD58P19256 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 TFAMP1-201ENST00000412727 736 ntBASIC17.66■□□□□ 0.42
CD58P19256 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.66■□□□□ 0.42
CD58P19256 ADH5P3-201ENST00000433842 1137 ntBASIC17.66■□□□□ 0.42
CD58P19256 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.66■□□□□ 0.42
CD58P19256 TIMM8BP1-201ENST00000452384 211 ntBASIC17.66■□□□□ 0.42
CD58P19256 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CD58P19256 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.66■□□□□ 0.42
CD58P19256 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.66■□□□□ 0.42
CD58P19256 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CD58P19256 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.66■□□□□ 0.42
CD58P19256 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.66■□□□□ 0.42
CD58P19256 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.66■□□□□ 0.42
CD58P19256 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD58P19256 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.66■□□□□ 0.42
CD58P19256 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CD58P19256 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.65■□□□□ 0.42
CD58P19256 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.65■□□□□ 0.42
CD58P19256 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.65■□□□□ 0.42
CD58P19256 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.65■□□□□ 0.42
CD58P19256 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CD58P19256 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.65■□□□□ 0.42
CD58P19256 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CD58P19256 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.65■□□□□ 0.42
CD58P19256 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.65■□□□□ 0.42
CD58P19256 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CD58P19256 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.65■□□□□ 0.42
CD58P19256 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.65■□□□□ 0.42
CD58P19256 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.65■□□□□ 0.42
CD58P19256 ACTG1P14-201ENST00000446382 1122 ntBASIC17.65■□□□□ 0.42
CD58P19256 KRT8P48-201ENST00000515599 1220 ntBASIC17.65■□□□□ 0.42
CD58P19256 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.65■□□□□ 0.42
CD58P19256 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.65■□□□□ 0.42
CD58P19256 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.65■□□□□ 0.42
CD58P19256 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CD58P19256 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD58P19256 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.65■□□□□ 0.42
CD58P19256 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.65■□□□□ 0.42
CD58P19256 AC008741.2-201ENST00000612792 3115 ntBASIC17.65■□□□□ 0.42
CD58P19256 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CD58P19256 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.65■□□□□ 0.42
CD58P19256 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
CD58P19256 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
CD58P19256 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CD58P19256 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.64■□□□□ 0.41
CD58P19256 LINC01144-201ENST00000626198 1710 ntBASIC17.64■□□□□ 0.41
CD58P19256 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.64■□□□□ 0.41
CD58P19256 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD58P19256 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD58P19256 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CD58P19256 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms