Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.56■□□□□ 0.24
KRT4P19013 PPT1-215ENST00000641471 2368 ntBASIC16.56■□□□□ 0.24
KRT4P19013 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
KRT4P19013 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT4P19013 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT4P19013 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT4P19013 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
KRT4P19013 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT4P19013 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT4P19013 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
KRT4P19013 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.56■□□□□ 0.24
KRT4P19013 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.56■□□□□ 0.24
KRT4P19013 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT4P19013 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.56■□□□□ 0.24
KRT4P19013 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT4P19013 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.56■□□□□ 0.24
KRT4P19013 AC104819.1-201ENST00000504587 486 ntBASIC16.56■□□□□ 0.24
KRT4P19013 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.56■□□□□ 0.24
KRT4P19013 AC091167.2-201ENST00000579581 588 ntBASIC16.56■□□□□ 0.24
KRT4P19013 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.56■□□□□ 0.24
KRT4P19013 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.56■□□□□ 0.24
KRT4P19013 AC116407.4-201ENST00000623319 1061 ntBASIC16.56■□□□□ 0.24
KRT4P19013 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.56■□□□□ 0.24
KRT4P19013 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
KRT4P19013 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT4P19013 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
KRT4P19013 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT4P19013 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT4P19013 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT4P19013 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT4P19013 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT4P19013 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT4P19013 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT4P19013 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT4P19013 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
KRT4P19013 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT4P19013 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
KRT4P19013 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT4P19013 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT4P19013 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT4P19013 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT4P19013 NORAD-201ENST00000565493 5339 ntBASIC16.55■□□□□ 0.24
KRT4P19013 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
KRT4P19013 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
KRT4P19013 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT4P19013 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT4P19013 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT4P19013 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT4P19013 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT4P19013 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT4P19013 RCN1P1-201ENST00000400413 996 ntBASIC16.55■□□□□ 0.24
KRT4P19013 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.55■□□□□ 0.24
KRT4P19013 AC087163.2-201ENST00000457299 853 ntBASIC16.55■□□□□ 0.24
KRT4P19013 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT4P19013 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT4P19013 CYP2A7P1-201ENST00000595391 815 ntBASIC16.55■□□□□ 0.24
KRT4P19013 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT4P19013 AL022326.1-202ENST00000641533 845 ntBASIC16.55■□□□□ 0.24
KRT4P19013 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT4P19013 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT4P19013 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.55■□□□□ 0.24
KRT4P19013 AP003680.1-201ENST00000598970 3660 ntBASIC16.55■□□□□ 0.24
KRT4P19013 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT4P19013 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT4P19013 SLC22A20-204ENST00000530038 1673 ntBASIC16.55■□□□□ 0.24
KRT4P19013 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT4P19013 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT4P19013 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.55■□□□□ 0.24
KRT4P19013 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT4P19013 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT4P19013 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
KRT4P19013 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
KRT4P19013 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT4P19013 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT4P19013 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
KRT4P19013 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
KRT4P19013 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT4P19013 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT4P19013 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
KRT4P19013 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT4P19013 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
KRT4P19013 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT4P19013 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT4P19013 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.54■□□□□ 0.24
KRT4P19013 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT4P19013 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT4P19013 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.54■□□□□ 0.24
KRT4P19013 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT4P19013 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT4P19013 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT4P19013 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT4P19013 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT4P19013 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT4P19013 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.54■□□□□ 0.24
KRT4P19013 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.54■□□□□ 0.24
KRT4P19013 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT4P19013 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT4P19013 AP000867.3-201ENST00000524675 377 ntBASIC16.54■□□□□ 0.24
KRT4P19013 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.54■□□□□ 0.24
KRT4P19013 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms