Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 MIR4492-201ENST00000581627 80 ntBASIC15.32■□□□□ 0.04
TPRP12270 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.32■□□□□ 0.04
TPRP12270 AC132192.2-201ENST00000596206 1147 ntBASIC15.32■□□□□ 0.04
TPRP12270 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.32■□□□□ 0.04
TPRP12270 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPRP12270 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPRP12270 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TPRP12270 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPRP12270 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPRP12270 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPRP12270 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
TPRP12270 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
TPRP12270 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPRP12270 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPRP12270 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TPRP12270 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.32■□□□□ 0.04
TPRP12270 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPRP12270 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TPRP12270 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPRP12270 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPRP12270 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPRP12270 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPRP12270 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPRP12270 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPRP12270 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPRP12270 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.32■□□□□ 0.04
TPRP12270 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TPRP12270 EEF1DP6-201ENST00000449232 372 ntBASIC15.32■□□□□ 0.04
TPRP12270 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.32■□□□□ 0.04
TPRP12270 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.32■□□□□ 0.04
TPRP12270 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.32■□□□□ 0.04
TPRP12270 MIR3147-201ENST00000577811 66 ntBASIC15.32■□□□□ 0.04
TPRP12270 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPRP12270 DGAT2L7P-201ENST00000602462 744 ntBASIC15.32■□□□□ 0.04
TPRP12270 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.32■□□□□ 0.04
TPRP12270 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPRP12270 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPRP12270 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPRP12270 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TPRP12270 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPRP12270 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPRP12270 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.31■□□□□ 0.04
TPRP12270 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPRP12270 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPRP12270 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPRP12270 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.31■□□□□ 0.04
TPRP12270 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TPRP12270 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPRP12270 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.31■□□□□ 0.04
TPRP12270 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.31■□□□□ 0.04
TPRP12270 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.31■□□□□ 0.04
TPRP12270 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC15.31■□□□□ 0.04
TPRP12270 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.31■□□□□ 0.04
TPRP12270 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.31■□□□□ 0.04
TPRP12270 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TPRP12270 CU633904.3-201ENST00000624042 1029 ntBASIC15.31■□□□□ 0.04
TPRP12270 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.31■□□□□ 0.04
TPRP12270 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.31■□□□□ 0.04
TPRP12270 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.31■□□□□ 0.04
TPRP12270 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
TPRP12270 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPRP12270 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.31■□□□□ 0.04
TPRP12270 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPRP12270 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPRP12270 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPRP12270 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPRP12270 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPRP12270 IDS-203ENST00000428056 1213 ntTSL 2 BASIC15.31■□□□□ 0.04
TPRP12270 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.31■□□□□ 0.04
TPRP12270 AC126915.1-201ENST00000522847 1038 ntBASIC15.31■□□□□ 0.04
TPRP12270 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.31■□□□□ 0.04
TPRP12270 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.31■□□□□ 0.04
TPRP12270 AC036164.1-201ENST00000570544 333 ntBASIC15.31■□□□□ 0.04
TPRP12270 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.31■□□□□ 0.04
TPRP12270 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TPRP12270 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPRP12270 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TPRP12270 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPRP12270 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.3■□□□□ 0.04
TPRP12270 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.3■□□□□ 0.04
TPRP12270 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.3■□□□□ 0.04
TPRP12270 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.3■□□□□ 0.04
TPRP12270 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
TPRP12270 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPRP12270 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPRP12270 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
TPRP12270 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPRP12270 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TPRP12270 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPRP12270 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.3■□□□□ 0.04
TPRP12270 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPRP12270 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TPRP12270 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPRP12270 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TPRP12270 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC15.3■□□□□ 0.04
TPRP12270 MTX1P1-201ENST00000440904 838 ntBASIC15.3■□□□□ 0.04
TPRP12270 SPTLC1P5-201ENST00000450718 252 ntBASIC15.3■□□□□ 0.04
TPRP12270 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.3■□□□□ 0.04
TPRP12270 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.3■□□□□ 0.04
TPRP12270 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms