Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL160237.2-201ENST00000556165 472 ntBASIC16.29■□□□□ 0.2
COL6A2P12110 MIR3909-201ENST00000579518 119 ntBASIC16.29■□□□□ 0.2
COL6A2P12110 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
COL6A2P12110 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COL6A2P12110 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.29■□□□□ 0.2
COL6A2P12110 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A2P12110 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A2P12110 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.28■□□□□ 0.2
COL6A2P12110 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A2P12110 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A2P12110 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
COL6A2P12110 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
COL6A2P12110 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A2P12110 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.28■□□□□ 0.2
COL6A2P12110 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A2P12110 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.28■□□□□ 0.2
COL6A2P12110 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.28■□□□□ 0.2
COL6A2P12110 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
COL6A2P12110 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.28■□□□□ 0.2
COL6A2P12110 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.28■□□□□ 0.2
COL6A2P12110 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.28■□□□□ 0.2
COL6A2P12110 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.28■□□□□ 0.2
COL6A2P12110 FAM185BP-201ENST00000443595 716 ntBASIC16.28■□□□□ 0.2
COL6A2P12110 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A2P12110 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.28■□□□□ 0.2
COL6A2P12110 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.28■□□□□ 0.2
COL6A2P12110 AC105339.3-201ENST00000560043 636 ntBASIC16.28■□□□□ 0.2
COL6A2P12110 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.28■□□□□ 0.2
COL6A2P12110 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
COL6A2P12110 AL356488.2-201ENST00000602755 427 ntBASIC16.28■□□□□ 0.2
COL6A2P12110 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
COL6A2P12110 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
COL6A2P12110 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.28■□□□□ 0.2
COL6A2P12110 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A2P12110 TCAF2P1-201ENST00000291129 2421 ntBASIC16.28■□□□□ 0.2
COL6A2P12110 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.28■□□□□ 0.2
COL6A2P12110 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A2P12110 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.28■□□□□ 0.2
COL6A2P12110 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A2P12110 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
COL6A2P12110 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A2P12110 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A2P12110 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL6A2P12110 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.28■□□□□ 0.2
COL6A2P12110 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL6A2P12110 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.27■□□□□ 0.2
COL6A2P12110 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL6A2P12110 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
COL6A2P12110 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL6A2P12110 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL6A2P12110 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
COL6A2P12110 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
COL6A2P12110 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.27■□□□□ 0.2
COL6A2P12110 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL6A2P12110 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
COL6A2P12110 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
COL6A2P12110 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL6A2P12110 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL6A2P12110 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
COL6A2P12110 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.27■□□□□ 0.2
COL6A2P12110 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL6A2P12110 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.27■□□□□ 0.2
COL6A2P12110 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.27■□□□□ 0.2
COL6A2P12110 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.27■□□□□ 0.2
COL6A2P12110 RNPS1P1-201ENST00000507437 918 ntBASIC16.27■□□□□ 0.2
COL6A2P12110 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL6A2P12110 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.27■□□□□ 0.2
COL6A2P12110 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.27■□□□□ 0.2
COL6A2P12110 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.27■□□□□ 0.2
COL6A2P12110 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL6A2P12110 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.27■□□□□ 0.19
COL6A2P12110 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL6A2P12110 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.27■□□□□ 0.19
COL6A2P12110 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.27■□□□□ 0.19
COL6A2P12110 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL6A2P12110 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
COL6A2P12110 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
COL6A2P12110 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL6A2P12110 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.26■□□□□ 0.19
COL6A2P12110 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.26■□□□□ 0.19
COL6A2P12110 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL6A2P12110 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL6A2P12110 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.26■□□□□ 0.19
COL6A2P12110 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL6A2P12110 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
COL6A2P12110 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.26■□□□□ 0.19
COL6A2P12110 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL6A2P12110 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms