Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A1P11836 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A1P11836 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A1P11836 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A1P11836 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A1P11836 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A1P11836 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
MS4A1P11836 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A1P11836 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A1P11836 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A1P11836 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.15■□□□□ 0.98
MS4A1P11836 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
MS4A1P11836 HLA-A-201ENST00000376802 1334 ntBASIC21.15■□□□□ 0.98
MS4A1P11836 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.15■□□□□ 0.98
MS4A1P11836 DPM2-202ENST00000373110 738 ntTSL 2 BASIC21.15■□□□□ 0.98
MS4A1P11836 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
MS4A1P11836 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.15■□□□□ 0.98
MS4A1P11836 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.15■□□□□ 0.98
MS4A1P11836 AL031055.1-201ENST00000606362 631 ntBASIC21.15■□□□□ 0.98
MS4A1P11836 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
MS4A1P11836 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A1P11836 AC092850.2-201ENST00000623821 2697 ntBASIC21.15■□□□□ 0.98
MS4A1P11836 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A1P11836 HYMAI-201ENST00000635591 3347 ntBASIC21.15■□□□□ 0.98
MS4A1P11836 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A1P11836 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A1P11836 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A1P11836 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A1P11836 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A1P11836 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A1P11836 AMT-233ENST00000636522 1620 ntTSL 2 BASIC21.15■□□□□ 0.98
MS4A1P11836 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A1P11836 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MS4A1P11836 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MS4A1P11836 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC21.14■□□□□ 0.98
MS4A1P11836 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.98
MS4A1P11836 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.14■□□□□ 0.98
MS4A1P11836 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MS4A1P11836 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MS4A1P11836 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC21.14■□□□□ 0.98
MS4A1P11836 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MS4A1P11836 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MS4A1P11836 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC21.14■□□□□ 0.97
MS4A1P11836 RHOQP3-201ENST00000437982 621 ntBASIC21.14■□□□□ 0.97
MS4A1P11836 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
MS4A1P11836 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
MS4A1P11836 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC21.14■□□□□ 0.97
MS4A1P11836 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.14■□□□□ 0.97
MS4A1P11836 AC007064.4-201ENST00000637740 555 ntBASIC21.14■□□□□ 0.97
MS4A1P11836 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
MS4A1P11836 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.14■□□□□ 0.97
MS4A1P11836 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MS4A1P11836 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MS4A1P11836 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MS4A1P11836 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
MS4A1P11836 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC21.14■□□□□ 0.97
MS4A1P11836 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MS4A1P11836 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MS4A1P11836 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
MS4A1P11836 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MS4A1P11836 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
MS4A1P11836 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MS4A1P11836 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC21.14■□□□□ 0.97
MS4A1P11836 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
MS4A1P11836 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC21.13■□□□□ 0.97
MS4A1P11836 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
MS4A1P11836 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.13■□□□□ 0.97
MS4A1P11836 IGLL3P-201ENST00000412472 434 ntBASIC21.13■□□□□ 0.97
MS4A1P11836 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.13■□□□□ 0.97
MS4A1P11836 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
MS4A1P11836 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.13■□□□□ 0.97
MS4A1P11836 Z83851.2-201ENST00000609564 659 ntBASIC21.13■□□□□ 0.97
MS4A1P11836 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
MS4A1P11836 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC21.13■□□□□ 0.97
MS4A1P11836 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
MS4A1P11836 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A1P11836 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
MS4A1P11836 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC21.13■□□□□ 0.97
MS4A1P11836 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MS4A1P11836 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms