Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.39□□□□□ -0.11
SFTPBP07988 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SFTPBP07988 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SFTPBP07988 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SFTPBP07988 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SFTPBP07988 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.39□□□□□ -0.11
SFTPBP07988 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.39□□□□□ -0.11
SFTPBP07988 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SFTPBP07988 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.39□□□□□ -0.11
SFTPBP07988 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.39□□□□□ -0.11
SFTPBP07988 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.39□□□□□ -0.11
SFTPBP07988 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.39□□□□□ -0.11
SFTPBP07988 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SFTPBP07988 TERC-201ENST00000602385 541 ntBASIC14.39□□□□□ -0.11
SFTPBP07988 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.39□□□□□ -0.11
SFTPBP07988 LINC00895-201ENST00000629028 1637 ntBASIC14.39□□□□□ -0.11
SFTPBP07988 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.39□□□□□ -0.11
SFTPBP07988 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SFTPBP07988 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SFTPBP07988 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SFTPBP07988 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.39□□□□□ -0.11
SFTPBP07988 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SFTPBP07988 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.39□□□□□ -0.11
SFTPBP07988 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SFTPBP07988 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.39□□□□□ -0.11
SFTPBP07988 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SFTPBP07988 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SFTPBP07988 ALOX12P2-203ENST00000570921 1945 ntBASIC14.39□□□□□ -0.11
SFTPBP07988 IL9RP2-201ENST00000423948 1312 ntBASIC14.39□□□□□ -0.11
SFTPBP07988 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.39□□□□□ -0.11
SFTPBP07988 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
SFTPBP07988 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SFTPBP07988 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPBP07988 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
SFTPBP07988 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SFTPBP07988 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPBP07988 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPBP07988 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SFTPBP07988 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPBP07988 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.38□□□□□ -0.11
SFTPBP07988 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SFTPBP07988 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPBP07988 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.38□□□□□ -0.11
SFTPBP07988 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPBP07988 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPBP07988 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.38□□□□□ -0.11
SFTPBP07988 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SFTPBP07988 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.38□□□□□ -0.11
SFTPBP07988 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.38□□□□□ -0.11
SFTPBP07988 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.38□□□□□ -0.11
SFTPBP07988 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.38□□□□□ -0.11
SFTPBP07988 OR7E14P-202ENST00000530490 1290 ntBASIC14.38□□□□□ -0.11
SFTPBP07988 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.38□□□□□ -0.11
SFTPBP07988 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.38□□□□□ -0.11
SFTPBP07988 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPBP07988 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.38□□□□□ -0.11
SFTPBP07988 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.38□□□□□ -0.11
SFTPBP07988 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.38□□□□□ -0.11
SFTPBP07988 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPBP07988 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SFTPBP07988 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPBP07988 KRT8P49-201ENST00000604166 1432 ntBASIC14.38□□□□□ -0.11
SFTPBP07988 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SFTPBP07988 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.38□□□□□ -0.11
SFTPBP07988 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPBP07988 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPBP07988 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SFTPBP07988 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SFTPBP07988 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPBP07988 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPBP07988 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPBP07988 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPBP07988 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPBP07988 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.37□□□□□ -0.11
SFTPBP07988 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPBP07988 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SFTPBP07988 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SFTPBP07988 RPS2P28-201ENST00000314255 741 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms