Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 REXO1L3P-201ENST00000622202 1288 ntBASIC16.25■□□□□ 0.19
CAPN1P07384 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN1P07384 AC010507.1-201ENST00000633895 436 ntBASIC16.25■□□□□ 0.19
CAPN1P07384 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN1P07384 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN1P07384 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.25■□□□□ 0.19
CAPN1P07384 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.25■□□□□ 0.19
CAPN1P07384 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN1P07384 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN1P07384 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN1P07384 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CAPN1P07384 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN1P07384 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CAPN1P07384 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.24■□□□□ 0.19
CAPN1P07384 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN1P07384 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN1P07384 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.24■□□□□ 0.19
CAPN1P07384 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN1P07384 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPN1P07384 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPN1P07384 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN1P07384 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN1P07384 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN1P07384 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN1P07384 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CAPN1P07384 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.24■□□□□ 0.19
CAPN1P07384 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
CAPN1P07384 RHOQP3-201ENST00000437982 621 ntBASIC16.24■□□□□ 0.19
CAPN1P07384 ALG1L5P-201ENST00000482043 771 ntBASIC16.24■□□□□ 0.19
CAPN1P07384 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPN1P07384 AC096734.2-201ENST00000562054 433 ntBASIC16.24■□□□□ 0.19
CAPN1P07384 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.24■□□□□ 0.19
CAPN1P07384 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CAPN1P07384 MIR4492-201ENST00000581627 80 ntBASIC16.24■□□□□ 0.19
CAPN1P07384 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPN1P07384 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPN1P07384 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN1P07384 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.24■□□□□ 0.19
CAPN1P07384 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPN1P07384 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN1P07384 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN1P07384 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CAPN1P07384 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN1P07384 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPN1P07384 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN1P07384 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN1P07384 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CAPN1P07384 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
CAPN1P07384 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPN1P07384 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPN1P07384 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPN1P07384 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CAPN1P07384 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.23■□□□□ 0.19
CAPN1P07384 RPS8P6-201ENST00000426177 609 ntBASIC16.23■□□□□ 0.19
CAPN1P07384 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.23■□□□□ 0.19
CAPN1P07384 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.23■□□□□ 0.19
CAPN1P07384 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 SLC25A6P2-201ENST00000497974 877 ntBASIC16.23■□□□□ 0.19
CAPN1P07384 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.23■□□□□ 0.19
CAPN1P07384 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPN1P07384 AC005829.1-201ENST00000570002 483 ntBASIC16.23■□□□□ 0.19
CAPN1P07384 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPN1P07384 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.23■□□□□ 0.19
CAPN1P07384 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPN1P07384 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
CAPN1P07384 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 GGT3P-204ENST00000453783 1664 ntBASIC16.23■□□□□ 0.19
CAPN1P07384 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CAPN1P07384 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPN1P07384 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPN1P07384 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPN1P07384 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPN1P07384 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CAPN1P07384 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPN1P07384 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN1P07384 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.22■□□□□ 0.19
CAPN1P07384 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN1P07384 AL512652.2-201ENST00000625156 1716 ntBASIC16.22■□□□□ 0.19
CAPN1P07384 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CAPN1P07384 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN1P07384 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms