Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TPM3P06753 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.52■□□□□ 0.55
TPM3P06753 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
TPM3P06753 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.52■□□□□ 0.55
TPM3P06753 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TPM3P06753 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TPM3P06753 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TPM3P06753 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TPM3P06753 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
TPM3P06753 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
TPM3P06753 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.51■□□□□ 0.55
TPM3P06753 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM3P06753 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM3P06753 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM3P06753 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM3P06753 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM3P06753 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM3P06753 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
TPM3P06753 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM3P06753 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
TPM3P06753 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM3P06753 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM3P06753 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM3P06753 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM3P06753 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TPM3P06753 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM3P06753 BX276092.5-203ENST00000456199 560 ntBASIC18.51■□□□□ 0.55
TPM3P06753 AL136038.3-201ENST00000561909 1096 ntBASIC18.51■□□□□ 0.55
TPM3P06753 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.51■□□□□ 0.55
TPM3P06753 NTF6B-201ENST00000591913 560 ntBASIC18.51■□□□□ 0.55
TPM3P06753 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.51■□□□□ 0.55
TPM3P06753 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM3P06753 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM3P06753 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM3P06753 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.51■□□□□ 0.55
TPM3P06753 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.51■□□□□ 0.55
TPM3P06753 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.51■□□□□ 0.55
TPM3P06753 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM3P06753 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM3P06753 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.5■□□□□ 0.55
TPM3P06753 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM3P06753 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TPM3P06753 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM3P06753 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM3P06753 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.5■□□□□ 0.55
TPM3P06753 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TPM3P06753 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.5■□□□□ 0.55
TPM3P06753 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM3P06753 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
TPM3P06753 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TPM3P06753 AL009178.2-201ENST00000597278 2719 ntBASIC18.5■□□□□ 0.55
TPM3P06753 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM3P06753 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM3P06753 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.5■□□□□ 0.55
TPM3P06753 LINC00982-205ENST00000420957 435 ntBASIC18.5■□□□□ 0.55
TPM3P06753 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.5■□□□□ 0.55
TPM3P06753 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
TPM3P06753 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM3P06753 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
TPM3P06753 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.5■□□□□ 0.55
TPM3P06753 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.5■□□□□ 0.55
TPM3P06753 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.5■□□□□ 0.55
TPM3P06753 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM3P06753 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC18.5■□□□□ 0.55
TPM3P06753 AC243591.1-201ENST00000452967 1364 ntBASIC18.5■□□□□ 0.55
TPM3P06753 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TPM3P06753 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.5■□□□□ 0.55
TPM3P06753 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TPM3P06753 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TPM3P06753 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.49■□□□□ 0.55
TPM3P06753 SIGLEC16-201ENST00000599858 1437 ntBASIC18.49■□□□□ 0.55
TPM3P06753 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM3P06753 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.49■□□□□ 0.55
TPM3P06753 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM3P06753 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.49■□□□□ 0.55
TPM3P06753 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM3P06753 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.49■□□□□ 0.55
TPM3P06753 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.49■□□□□ 0.55
TPM3P06753 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM3P06753 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM3P06753 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TPM3P06753 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
TPM3P06753 AC091607.1-201ENST00000490318 1060 ntBASIC18.49■□□□□ 0.55
TPM3P06753 AC096582.2-201ENST00000510860 516 ntBASIC18.49■□□□□ 0.55
TPM3P06753 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.49■□□□□ 0.55
TPM3P06753 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM3P06753 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TPM3P06753 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM3P06753 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM3P06753 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM3P06753 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM3P06753 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.49■□□□□ 0.55
TPM3P06753 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
TPM3P06753 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TPM3P06753 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM3P06753 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.49■□□□□ 0.55
TPM3P06753 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.49■□□□□ 0.55
TPM3P06753 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.49■□□□□ 0.55
TPM3P06753 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TPM3P06753 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms