Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND3P03897 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND3P03897 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
MT-ND3P03897 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.84■□□□□ 0.29
MT-ND3P03897 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND3P03897 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
MT-ND3P03897 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND3P03897 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MT-ND3P03897 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.84■□□□□ 0.29
MT-ND3P03897 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MT-ND3P03897 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND3P03897 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.84■□□□□ 0.29
MT-ND3P03897 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
MT-ND3P03897 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.83■□□□□ 0.29
MT-ND3P03897 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.83■□□□□ 0.29
MT-ND3P03897 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
MT-ND3P03897 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
MT-ND3P03897 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MT-ND3P03897 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MT-ND3P03897 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.83■□□□□ 0.29
MT-ND3P03897 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND3P03897 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
MT-ND3P03897 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND3P03897 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.83■□□□□ 0.28
MT-ND3P03897 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.83■□□□□ 0.28
MT-ND3P03897 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND3P03897 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.83■□□□□ 0.28
MT-ND3P03897 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND3P03897 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.83■□□□□ 0.28
MT-ND3P03897 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
MT-ND3P03897 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND3P03897 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.83■□□□□ 0.28
MT-ND3P03897 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND3P03897 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.83■□□□□ 0.28
MT-ND3P03897 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND3P03897 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.83■□□□□ 0.28
MT-ND3P03897 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.83■□□□□ 0.28
MT-ND3P03897 SLC25A1P1-201ENST00000528351 927 ntBASIC16.83■□□□□ 0.28
MT-ND3P03897 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND3P03897 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND3P03897 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND3P03897 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND3P03897 AL671883.3-201ENST00000603274 991 ntBASIC16.83■□□□□ 0.28
MT-ND3P03897 AC116407.3-201ENST00000623905 1129 ntBASIC16.83■□□□□ 0.28
MT-ND3P03897 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.83■□□□□ 0.28
MT-ND3P03897 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
MT-ND3P03897 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
MT-ND3P03897 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-ND3P03897 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
MT-ND3P03897 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
MT-ND3P03897 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.82■□□□□ 0.28
MT-ND3P03897 AL603832.2-201ENST00000566195 2125 ntBASIC16.82■□□□□ 0.28
MT-ND3P03897 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
MT-ND3P03897 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
MT-ND3P03897 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.82■□□□□ 0.28
MT-ND3P03897 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.82■□□□□ 0.28
MT-ND3P03897 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.82■□□□□ 0.28
MT-ND3P03897 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 AC002310.6-201ENST00000624451 1377 ntBASIC16.82■□□□□ 0.28
MT-ND3P03897 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.82■□□□□ 0.28
MT-ND3P03897 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.82■□□□□ 0.28
MT-ND3P03897 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.82■□□□□ 0.28
MT-ND3P03897 HNRNPDP1-201ENST00000439535 754 ntBASIC16.82■□□□□ 0.28
MT-ND3P03897 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
MT-ND3P03897 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.82■□□□□ 0.28
MT-ND3P03897 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.82■□□□□ 0.28
MT-ND3P03897 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.82■□□□□ 0.28
MT-ND3P03897 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.82■□□□□ 0.28
MT-ND3P03897 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.82■□□□□ 0.28
MT-ND3P03897 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 GGT4P-201ENST00000623672 1708 ntBASIC16.82■□□□□ 0.28
MT-ND3P03897 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND3P03897 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND3P03897 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.81■□□□□ 0.28
MT-ND3P03897 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND3P03897 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MT-ND3P03897 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND3P03897 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND3P03897 AL671710.1-201ENST00000610245 2349 ntBASIC16.81■□□□□ 0.28
MT-ND3P03897 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms