Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
APOC1P02654 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOC1P02654 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.62□□□□□ -0.07
APOC1P02654 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOC1P02654 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
APOC1P02654 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.62□□□□□ -0.07
APOC1P02654 KRT18P56-201ENST00000507275 550 ntBASIC14.62□□□□□ -0.07
APOC1P02654 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.62□□□□□ -0.07
APOC1P02654 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.62□□□□□ -0.07
APOC1P02654 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.62□□□□□ -0.07
APOC1P02654 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.62□□□□□ -0.07
APOC1P02654 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOC1P02654 AC008667.4-201ENST00000607370 168 ntBASIC14.62□□□□□ -0.07
APOC1P02654 AC005593.1-201ENST00000624894 515 ntBASIC14.62□□□□□ -0.07
APOC1P02654 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOC1P02654 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
APOC1P02654 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOC1P02654 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOC1P02654 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.62□□□□□ -0.07
APOC1P02654 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOC1P02654 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOC1P02654 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOC1P02654 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
APOC1P02654 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.62□□□□□ -0.07
APOC1P02654 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
APOC1P02654 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOC1P02654 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOC1P02654 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.61□□□□□ -0.07
APOC1P02654 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.61□□□□□ -0.07
APOC1P02654 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
APOC1P02654 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
APOC1P02654 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
APOC1P02654 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOC1P02654 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOC1P02654 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
APOC1P02654 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.61□□□□□ -0.07
APOC1P02654 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
APOC1P02654 AC006449.5-201ENST00000610658 2098 ntBASIC14.61□□□□□ -0.07
APOC1P02654 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
APOC1P02654 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
APOC1P02654 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOC1P02654 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOC1P02654 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.61□□□□□ -0.07
APOC1P02654 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOC1P02654 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOC1P02654 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.61□□□□□ -0.07
APOC1P02654 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
APOC1P02654 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.61□□□□□ -0.07
APOC1P02654 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOC1P02654 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.61□□□□□ -0.07
APOC1P02654 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOC1P02654 RNPS1P1-201ENST00000507437 918 ntBASIC14.61□□□□□ -0.07
APOC1P02654 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.61□□□□□ -0.07
APOC1P02654 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.61□□□□□ -0.07
APOC1P02654 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.61□□□□□ -0.07
APOC1P02654 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.61□□□□□ -0.07
APOC1P02654 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.61□□□□□ -0.07
APOC1P02654 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.61□□□□□ -0.07
APOC1P02654 AC105339.3-201ENST00000560043 636 ntBASIC14.61□□□□□ -0.07
APOC1P02654 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.61□□□□□ -0.07
APOC1P02654 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.61□□□□□ -0.07
APOC1P02654 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.61□□□□□ -0.07
APOC1P02654 AC008735.5-201ENST00000623544 497 ntBASIC14.61□□□□□ -0.07
APOC1P02654 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
APOC1P02654 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
APOC1P02654 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOC1P02654 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOC1P02654 AC092171.3-201ENST00000610122 2651 ntBASIC14.61□□□□□ -0.07
APOC1P02654 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOC1P02654 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOC1P02654 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
APOC1P02654 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.61□□□□□ -0.07
APOC1P02654 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.61□□□□□ -0.07
APOC1P02654 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOC1P02654 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
APOC1P02654 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.61□□□□□ -0.07
APOC1P02654 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.61□□□□□ -0.07
APOC1P02654 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.61□□□□□ -0.07
APOC1P02654 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOC1P02654 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOC1P02654 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.61□□□□□ -0.07
APOC1P02654 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
APOC1P02654 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.6□□□□□ -0.07
APOC1P02654 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
APOC1P02654 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
APOC1P02654 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC1P02654 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.6□□□□□ -0.07
APOC1P02654 RPS2P1-201ENST00000434010 821 ntBASIC14.6□□□□□ -0.07
APOC1P02654 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.6□□□□□ -0.07
APOC1P02654 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms