Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DQA1P01909 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DQA1P01909 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
HLA-DQA1P01909 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HLA-DQA1P01909 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-DQA1P01909 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
HLA-DQA1P01909 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DQA1P01909 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DQA1P01909 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
HLA-DQA1P01909 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DQA1P01909 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DQA1P01909 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-DQA1P01909 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.42□□□□□ -0.42
HLA-DQA1P01909 AC139749.1-202ENST00000617529 3139 ntBASIC12.42□□□□□ -0.42
HLA-DQA1P01909 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 TSPY14P-201ENST00000303979 915 ntBASIC12.42□□□□□ -0.42
HLA-DQA1P01909 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 AC087499.1-201ENST00000418141 1075 ntBASIC12.42□□□□□ -0.42
HLA-DQA1P01909 AC007663.1-201ENST00000438948 1240 ntBASIC12.42□□□□□ -0.42
HLA-DQA1P01909 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.42□□□□□ -0.42
HLA-DQA1P01909 ECEL1P2-202ENST00000465689 757 ntBASIC12.42□□□□□ -0.42
HLA-DQA1P01909 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 AC019129.2-201ENST00000609837 1235 ntBASIC12.42□□□□□ -0.42
HLA-DQA1P01909 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 ST20-AS1-201ENST00000560255 4223 ntBASIC12.42□□□□□ -0.42
HLA-DQA1P01909 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 AC069224.1-201ENST00000566372 1715 ntBASIC12.42□□□□□ -0.42
HLA-DQA1P01909 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DQA1P01909 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-DQA1P01909 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms