Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.09■□□□□ 0.33
IFNB1P01574 AC005412.3-201ENST00000580309 715 ntBASIC17.09■□□□□ 0.33
IFNB1P01574 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.09■□□□□ 0.33
IFNB1P01574 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.09■□□□□ 0.33
IFNB1P01574 AC129492.6-201ENST00000611383 1305 ntBASIC17.09■□□□□ 0.33
IFNB1P01574 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.09■□□□□ 0.33
IFNB1P01574 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
IFNB1P01574 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.09■□□□□ 0.33
IFNB1P01574 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFNB1P01574 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.09■□□□□ 0.33
IFNB1P01574 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFNB1P01574 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
IFNB1P01574 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.09■□□□□ 0.33
IFNB1P01574 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFNB1P01574 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.09■□□□□ 0.33
IFNB1P01574 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFNB1P01574 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFNB1P01574 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.09■□□□□ 0.33
IFNB1P01574 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
IFNB1P01574 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFNB1P01574 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.09■□□□□ 0.33
IFNB1P01574 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFNB1P01574 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.09■□□□□ 0.33
IFNB1P01574 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
IFNB1P01574 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
IFNB1P01574 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IFNB1P01574 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IFNB1P01574 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IFNB1P01574 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IFNB1P01574 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
IFNB1P01574 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
IFNB1P01574 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IFNB1P01574 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IFNB1P01574 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IFNB1P01574 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.08■□□□□ 0.33
IFNB1P01574 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
IFNB1P01574 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.08■□□□□ 0.32
IFNB1P01574 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNB1P01574 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
IFNB1P01574 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNB1P01574 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNB1P01574 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNB1P01574 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNB1P01574 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IFNB1P01574 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.08■□□□□ 0.32
IFNB1P01574 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNB1P01574 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
IFNB1P01574 DUSP5P1-201ENST00000441325 1139 ntBASIC17.08■□□□□ 0.32
IFNB1P01574 UNC93B7-201ENST00000509439 705 ntBASIC17.08■□□□□ 0.32
IFNB1P01574 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.08■□□□□ 0.32
IFNB1P01574 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNB1P01574 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IFNB1P01574 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNB1P01574 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
IFNB1P01574 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNB1P01574 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
IFNB1P01574 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFNB1P01574 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IFNB1P01574 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFNB1P01574 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
IFNB1P01574 LINC01144-201ENST00000626198 1710 ntBASIC17.07■□□□□ 0.32
IFNB1P01574 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFNB1P01574 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.07■□□□□ 0.32
IFNB1P01574 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFNB1P01574 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.07■□□□□ 0.32
IFNB1P01574 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFNB1P01574 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IFNB1P01574 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.07■□□□□ 0.32
IFNB1P01574 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.07■□□□□ 0.32
IFNB1P01574 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
IFNB1P01574 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.07■□□□□ 0.32
IFNB1P01574 AC008667.4-201ENST00000607370 168 ntBASIC17.07■□□□□ 0.32
IFNB1P01574 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.07■□□□□ 0.32
IFNB1P01574 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.07■□□□□ 0.32
IFNB1P01574 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.07■□□□□ 0.32
IFNB1P01574 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFNB1P01574 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFNB1P01574 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFNB1P01574 AC105917.1-201ENST00000506637 2539 ntBASIC17.07■□□□□ 0.32
IFNB1P01574 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
IFNB1P01574 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.07■□□□□ 0.32
IFNB1P01574 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
IFNB1P01574 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IFNB1P01574 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
IFNB1P01574 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFNB1P01574 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
IFNB1P01574 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFNB1P01574 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFNB1P01574 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFNB1P01574 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
IFNB1P01574 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.06■□□□□ 0.32
IFNB1P01574 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IFNB1P01574 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
IFNB1P01574 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.06■□□□□ 0.32
IFNB1P01574 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
IFNB1P01574 HCG4-201ENST00000418983 998 ntBASIC17.06■□□□□ 0.32
IFNB1P01574 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.06■□□□□ 0.32
IFNB1P01574 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.06■□□□□ 0.32
IFNB1P01574 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.06■□□□□ 0.32
IFNB1P01574 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms