Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMP1P01033 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMP1P01033 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMP1P01033 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMP1P01033 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TIMP1P01033 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TIMP1P01033 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TIMP1P01033 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.52■□□□□ 0.4
TIMP1P01033 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TIMP1P01033 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
TIMP1P01033 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TIMP1P01033 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.52■□□□□ 0.4
TIMP1P01033 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TIMP1P01033 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TIMP1P01033 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.52■□□□□ 0.4
TIMP1P01033 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TIMP1P01033 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TIMP1P01033 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TIMP1P01033 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TIMP1P01033 BAATP1-201ENST00000412284 1225 ntBASIC17.52■□□□□ 0.4
TIMP1P01033 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.52■□□□□ 0.4
TIMP1P01033 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.52■□□□□ 0.4
TIMP1P01033 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.4
TIMP1P01033 RPL13AP25-201ENST00000484130 612 ntBASIC17.52■□□□□ 0.4
TIMP1P01033 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.52■□□□□ 0.4
TIMP1P01033 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.52■□□□□ 0.4
TIMP1P01033 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.52■□□□□ 0.4
TIMP1P01033 C2orf69P2-201ENST00000562032 1123 ntBASIC17.52■□□□□ 0.4
TIMP1P01033 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.52■□□□□ 0.4
TIMP1P01033 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TIMP1P01033 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TIMP1P01033 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TIMP1P01033 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TIMP1P01033 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.52■□□□□ 0.39
TIMP1P01033 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
TIMP1P01033 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TIMP1P01033 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TIMP1P01033 AC005622.1-201ENST00000636801 1703 ntBASIC17.52■□□□□ 0.39
TIMP1P01033 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
TIMP1P01033 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TIMP1P01033 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TIMP1P01033 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.51■□□□□ 0.39
TIMP1P01033 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMP1P01033 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TIMP1P01033 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMP1P01033 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMP1P01033 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TIMP1P01033 AC134043.2-201ENST00000624206 2238 ntBASIC17.51■□□□□ 0.39
TIMP1P01033 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
TIMP1P01033 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMP1P01033 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TIMP1P01033 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMP1P01033 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.51■□□□□ 0.39
TIMP1P01033 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMP1P01033 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.51■□□□□ 0.39
TIMP1P01033 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
TIMP1P01033 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TIMP1P01033 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TIMP1P01033 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TIMP1P01033 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.51■□□□□ 0.39
TIMP1P01033 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.51■□□□□ 0.39
TIMP1P01033 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TIMP1P01033 AC009486.1-201ENST00000569860 813 ntBASIC17.51■□□□□ 0.39
TIMP1P01033 RN7SL560P-201ENST00000577943 264 ntBASIC17.51■□□□□ 0.39
TIMP1P01033 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.51■□□□□ 0.39
TIMP1P01033 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.51■□□□□ 0.39
TIMP1P01033 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.51■□□□□ 0.39
TIMP1P01033 AC091271.1-201ENST00000611877 1162 ntBASIC17.51■□□□□ 0.39
TIMP1P01033 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.51■□□□□ 0.39
TIMP1P01033 INTS4P2-202ENST00000614726 2019 ntBASIC17.51■□□□□ 0.39
TIMP1P01033 AC009542.2-202ENST00000619004 1067 ntBASIC17.51■□□□□ 0.39
TIMP1P01033 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.51■□□□□ 0.39
TIMP1P01033 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TIMP1P01033 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.51■□□□□ 0.39
TIMP1P01033 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TIMP1P01033 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMP1P01033 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMP1P01033 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.51■□□□□ 0.39
TIMP1P01033 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TIMP1P01033 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.51■□□□□ 0.39
TIMP1P01033 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.51■□□□□ 0.39
TIMP1P01033 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TIMP1P01033 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMP1P01033 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TIMP1P01033 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.51■□□□□ 0.39
TIMP1P01033 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TIMP1P01033 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TIMP1P01033 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TIMP1P01033 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TIMP1P01033 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TIMP1P01033 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TIMP1P01033 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TIMP1P01033 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TIMP1P01033 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMP1P01033 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMP1P01033 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.5■□□□□ 0.39
TIMP1P01033 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TIMP1P01033 AC004987.2-201ENST00000395959 1148 ntBASIC17.5■□□□□ 0.39
TIMP1P01033 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.5■□□□□ 0.39
TIMP1P01033 AC026954.1-201ENST00000429771 1293 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms