Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 AC009947.1-201ENST00000444350 727 ntBASIC18.29■□□□□ 0.52
CLSTN1O94985 IGHV3-22-201ENST00000520721 359 ntBASIC18.29■□□□□ 0.52
CLSTN1O94985 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.29■□□□□ 0.52
CLSTN1O94985 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.29■□□□□ 0.52
CLSTN1O94985 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CLSTN1O94985 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLSTN1O94985 CYP2T1P-202ENST00000641596 2535 ntBASIC18.29■□□□□ 0.52
CLSTN1O94985 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CLSTN1O94985 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.29■□□□□ 0.52
CLSTN1O94985 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.29■□□□□ 0.52
CLSTN1O94985 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLSTN1O94985 PCDH8P1-201ENST00000428983 2773 ntBASIC18.29■□□□□ 0.52
CLSTN1O94985 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.29■□□□□ 0.52
CLSTN1O94985 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.29■□□□□ 0.52
CLSTN1O94985 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLSTN1O94985 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.29■□□□□ 0.52
CLSTN1O94985 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.28■□□□□ 0.52
CLSTN1O94985 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.28■□□□□ 0.52
CLSTN1O94985 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CLSTN1O94985 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.28■□□□□ 0.52
CLSTN1O94985 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.28■□□□□ 0.52
CLSTN1O94985 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLSTN1O94985 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLSTN1O94985 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.28■□□□□ 0.52
CLSTN1O94985 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLSTN1O94985 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLSTN1O94985 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLSTN1O94985 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLSTN1O94985 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLSTN1O94985 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CLSTN1O94985 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CLSTN1O94985 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.28■□□□□ 0.52
CLSTN1O94985 MED15P5-201ENST00000423150 992 ntBASIC18.28■□□□□ 0.52
CLSTN1O94985 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.28■□□□□ 0.52
CLSTN1O94985 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.28■□□□□ 0.52
CLSTN1O94985 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.28■□□□□ 0.52
CLSTN1O94985 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CLSTN1O94985 AC010654.1-201ENST00000615722 808 ntBASIC18.28■□□□□ 0.52
CLSTN1O94985 BX640515.1-201ENST00000617215 977 ntBASIC18.28■□□□□ 0.52
CLSTN1O94985 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
CLSTN1O94985 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLSTN1O94985 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLSTN1O94985 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLSTN1O94985 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
CLSTN1O94985 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC18.28■□□□□ 0.52
CLSTN1O94985 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLSTN1O94985 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.28■□□□□ 0.52
CLSTN1O94985 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CLSTN1O94985 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLSTN1O94985 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLSTN1O94985 ABR-205ENST00000544583 5595 ntTSL 2 BASIC18.28■□□□□ 0.52
CLSTN1O94985 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLSTN1O94985 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLSTN1O94985 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CLSTN1O94985 AC002310.6-201ENST00000624451 1377 ntBASIC18.28■□□□□ 0.52
CLSTN1O94985 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLSTN1O94985 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLSTN1O94985 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLSTN1O94985 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.28■□□□□ 0.52
CLSTN1O94985 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLSTN1O94985 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLSTN1O94985 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
CLSTN1O94985 PCDHA3-202ENST00000532566 4594 ntBASIC18.27■□□□□ 0.52
CLSTN1O94985 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLSTN1O94985 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLSTN1O94985 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.27■□□□□ 0.52
CLSTN1O94985 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.27■□□□□ 0.52
CLSTN1O94985 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.27■□□□□ 0.52
CLSTN1O94985 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CLSTN1O94985 SLC25A6P2-201ENST00000497974 877 ntBASIC18.27■□□□□ 0.52
CLSTN1O94985 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.27■□□□□ 0.52
CLSTN1O94985 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLSTN1O94985 PCDHB17P-201ENST00000539533 2393 ntBASIC18.27■□□□□ 0.52
CLSTN1O94985 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.27■□□□□ 0.52
CLSTN1O94985 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.27■□□□□ 0.51
CLSTN1O94985 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CLSTN1O94985 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLSTN1O94985 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CLSTN1O94985 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CLSTN1O94985 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CLSTN1O94985 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLSTN1O94985 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLSTN1O94985 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.27■□□□□ 0.51
CLSTN1O94985 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CLSTN1O94985 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.27■□□□□ 0.51
CLSTN1O94985 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.27■□□□□ 0.51
CLSTN1O94985 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLSTN1O94985 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLSTN1O94985 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLSTN1O94985 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLSTN1O94985 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CLSTN1O94985 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.26■□□□□ 0.51
CLSTN1O94985 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLSTN1O94985 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CLSTN1O94985 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLSTN1O94985 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLSTN1O94985 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.26■□□□□ 0.51
CLSTN1O94985 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLSTN1O94985 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLSTN1O94985 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms