Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLN5O75503 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLN5O75503 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLN5O75503 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLN5O75503 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLN5O75503 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CLN5O75503 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLN5O75503 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLN5O75503 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLN5O75503 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLN5O75503 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
CLN5O75503 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLN5O75503 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.52□□□□□ -0.25
CLN5O75503 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.52□□□□□ -0.25
CLN5O75503 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.52□□□□□ -0.25
CLN5O75503 AL031133.1-201ENST00000406807 723 ntBASIC13.52□□□□□ -0.25
CLN5O75503 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.52□□□□□ -0.25
CLN5O75503 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.52□□□□□ -0.25
CLN5O75503 STK19B-204ENST00000512515 211 ntBASIC13.52□□□□□ -0.25
CLN5O75503 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.52□□□□□ -0.25
CLN5O75503 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.52□□□□□ -0.25
CLN5O75503 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CLN5O75503 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.52□□□□□ -0.25
CLN5O75503 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.52□□□□□ -0.25
CLN5O75503 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CLN5O75503 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.52□□□□□ -0.25
CLN5O75503 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.52□□□□□ -0.25
CLN5O75503 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLN5O75503 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CLN5O75503 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CLN5O75503 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
CLN5O75503 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.51□□□□□ -0.25
CLN5O75503 AC092053.1-201ENST00000605787 1936 ntBASIC13.51□□□□□ -0.25
CLN5O75503 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.51□□□□□ -0.25
CLN5O75503 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.51□□□□□ -0.25
CLN5O75503 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 AC003669.1-201ENST00000334569 611 ntBASIC13.51□□□□□ -0.25
CLN5O75503 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
CLN5O75503 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.51□□□□□ -0.25
CLN5O75503 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.51□□□□□ -0.25
CLN5O75503 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.51□□□□□ -0.25
CLN5O75503 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 NTF6B-201ENST00000591913 560 ntBASIC13.51□□□□□ -0.25
CLN5O75503 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CLN5O75503 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.51□□□□□ -0.25
CLN5O75503 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.51□□□□□ -0.25
CLN5O75503 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CLN5O75503 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CLN5O75503 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.51□□□□□ -0.25
CLN5O75503 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.51□□□□□ -0.25
CLN5O75503 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLN5O75503 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLN5O75503 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLN5O75503 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLN5O75503 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms