Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SNAI2O43623 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SNAI2O43623 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SNAI2O43623 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNAI2O43623 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
SNAI2O43623 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SNAI2O43623 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNAI2O43623 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNAI2O43623 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.39□□□□□ -0.43
SNAI2O43623 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNAI2O43623 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SNAI2O43623 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.39□□□□□ -0.43
SNAI2O43623 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.39□□□□□ -0.43
SNAI2O43623 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SNAI2O43623 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SNAI2O43623 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.39□□□□□ -0.43
SNAI2O43623 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SNAI2O43623 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.38□□□□□ -0.43
SNAI2O43623 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNAI2O43623 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SNAI2O43623 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNAI2O43623 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.38□□□□□ -0.43
SNAI2O43623 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SNAI2O43623 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.38□□□□□ -0.43
SNAI2O43623 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SNAI2O43623 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SNAI2O43623 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.38□□□□□ -0.43
SNAI2O43623 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNAI2O43623 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNAI2O43623 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.38□□□□□ -0.43
SNAI2O43623 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNAI2O43623 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
SNAI2O43623 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SNAI2O43623 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
SNAI2O43623 AL137013.1-201ENST00000432946 1228 ntBASIC12.38□□□□□ -0.43
SNAI2O43623 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.38□□□□□ -0.43
SNAI2O43623 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SNAI2O43623 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
SNAI2O43623 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC12.38□□□□□ -0.43
SNAI2O43623 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNAI2O43623 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC12.38□□□□□ -0.43
SNAI2O43623 AC090616.6-201ENST00000582640 721 ntBASIC12.38□□□□□ -0.43
SNAI2O43623 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.38□□□□□ -0.43
SNAI2O43623 AC011467.2-201ENST00000598425 242 ntBASIC12.38□□□□□ -0.43
SNAI2O43623 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.38□□□□□ -0.43
SNAI2O43623 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SNAI2O43623 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SNAI2O43623 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.38□□□□□ -0.43
SNAI2O43623 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.38□□□□□ -0.43
SNAI2O43623 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SNAI2O43623 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.38□□□□□ -0.43
SNAI2O43623 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNAI2O43623 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNAI2O43623 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNAI2O43623 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNAI2O43623 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.38□□□□□ -0.43
SNAI2O43623 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.38□□□□□ -0.43
SNAI2O43623 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SNAI2O43623 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.38□□□□□ -0.43
SNAI2O43623 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNAI2O43623 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SNAI2O43623 AC073347.1-201ENST00000421633 2643 ntBASIC12.38□□□□□ -0.43
SNAI2O43623 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNAI2O43623 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNAI2O43623 OR2I1P-209ENST00000641730 5365 ntBASIC12.38□□□□□ -0.43
SNAI2O43623 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SNAI2O43623 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNAI2O43623 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SNAI2O43623 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SNAI2O43623 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SNAI2O43623 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.37□□□□□ -0.43
SNAI2O43623 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.37□□□□□ -0.43
SNAI2O43623 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.37□□□□□ -0.43
SNAI2O43623 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNAI2O43623 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNAI2O43623 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNAI2O43623 MYO15B-237ENST00000642007 4893 ntBASIC12.37□□□□□ -0.43
SNAI2O43623 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
SNAI2O43623 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
SNAI2O43623 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNAI2O43623 AC138035.3-201ENST00000622706 2791 ntBASIC12.37□□□□□ -0.43
SNAI2O43623 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.37□□□□□ -0.43
SNAI2O43623 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SNAI2O43623 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.37□□□□□ -0.43
SNAI2O43623 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SNAI2O43623 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNAI2O43623 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNAI2O43623 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SNAI2O43623 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SNAI2O43623 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNAI2O43623 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SNAI2O43623 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SNAI2O43623 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.37□□□□□ -0.43
SNAI2O43623 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
SNAI2O43623 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SNAI2O43623 AC079781.5-202ENST00000641784 3743 ntBASIC12.37□□□□□ -0.43
SNAI2O43623 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNAI2O43623 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SNAI2O43623 TERF1P1-201ENST00000311003 1181 ntBASIC12.37□□□□□ -0.43
SNAI2O43623 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms