Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.37■□□□□ 0.85
SRGAP3O43295 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRGAP3O43295 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
SRGAP3O43295 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SRGAP3O43295 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRGAP3O43295 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRGAP3O43295 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.37■□□□□ 0.85
SRGAP3O43295 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
SRGAP3O43295 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SRGAP3O43295 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRGAP3O43295 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRGAP3O43295 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRGAP3O43295 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.37■□□□□ 0.85
SRGAP3O43295 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SRGAP3O43295 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SRGAP3O43295 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.37■□□□□ 0.85
SRGAP3O43295 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRGAP3O43295 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.37■□□□□ 0.85
SRGAP3O43295 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRGAP3O43295 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SRGAP3O43295 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRGAP3O43295 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRGAP3O43295 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.36■□□□□ 0.85
SRGAP3O43295 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SRGAP3O43295 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SRGAP3O43295 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SRGAP3O43295 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SRGAP3O43295 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SRGAP3O43295 AL118508.1-201ENST00000613502 2345 ntBASIC20.36■□□□□ 0.85
SRGAP3O43295 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
SRGAP3O43295 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
SRGAP3O43295 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SRGAP3O43295 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SRGAP3O43295 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.36■□□□□ 0.85
SRGAP3O43295 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SRGAP3O43295 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SRGAP3O43295 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.36■□□□□ 0.85
SRGAP3O43295 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SRGAP3O43295 RARRES2P9-201ENST00000565168 469 ntBASIC20.36■□□□□ 0.85
SRGAP3O43295 AP001059.3-201ENST00000619053 235 ntBASIC20.36■□□□□ 0.85
SRGAP3O43295 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.36■□□□□ 0.85
SRGAP3O43295 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SRGAP3O43295 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SRGAP3O43295 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SRGAP3O43295 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SRGAP3O43295 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SRGAP3O43295 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SRGAP3O43295 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SRGAP3O43295 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.36■□□□□ 0.85
SRGAP3O43295 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SRGAP3O43295 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRGAP3O43295 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRGAP3O43295 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRGAP3O43295 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SRGAP3O43295 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRGAP3O43295 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SRGAP3O43295 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRGAP3O43295 FAM220BP-201ENST00000377689 816 ntBASIC20.35■□□□□ 0.85
SRGAP3O43295 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
SRGAP3O43295 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.35■□□□□ 0.85
SRGAP3O43295 AC004449.1-201ENST00000564240 433 ntBASIC20.35■□□□□ 0.85
SRGAP3O43295 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.35■□□□□ 0.85
SRGAP3O43295 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRGAP3O43295 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRGAP3O43295 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.35■□□□□ 0.85
SRGAP3O43295 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRGAP3O43295 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.35■□□□□ 0.85
SRGAP3O43295 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRGAP3O43295 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRGAP3O43295 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC20.35■□□□□ 0.85
SRGAP3O43295 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.35■□□□□ 0.85
SRGAP3O43295 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRGAP3O43295 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
SRGAP3O43295 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SRGAP3O43295 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SRGAP3O43295 AL592424.1-201ENST00000563624 1536 ntBASIC20.34■□□□□ 0.85
SRGAP3O43295 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRGAP3O43295 HLA-H-201ENST00000383620 1096 ntBASIC20.34■□□□□ 0.85
SRGAP3O43295 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.34■□□□□ 0.85
SRGAP3O43295 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.34■□□□□ 0.85
SRGAP3O43295 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRGAP3O43295 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.34■□□□□ 0.85
SRGAP3O43295 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.34■□□□□ 0.85
SRGAP3O43295 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRGAP3O43295 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SRGAP3O43295 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SRGAP3O43295 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.34■□□□□ 0.85
SRGAP3O43295 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SRGAP3O43295 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.34■□□□□ 0.85
SRGAP3O43295 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRGAP3O43295 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SRGAP3O43295 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SRGAP3O43295 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.34■□□□□ 0.85
SRGAP3O43295 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.34■□□□□ 0.85
SRGAP3O43295 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SRGAP3O43295 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRGAP3O43295 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRGAP3O43295 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRGAP3O43295 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SRGAP3O43295 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms