Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLOCKO15516 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLOCKO15516 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLOCKO15516 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLOCKO15516 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLOCKO15516 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLOCKO15516 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLOCKO15516 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.71■□□□□ 0.11
CLOCKO15516 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.71■□□□□ 0.11
CLOCKO15516 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLOCKO15516 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLOCKO15516 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLOCKO15516 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLOCKO15516 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CLOCKO15516 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CLOCKO15516 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.71■□□□□ 0.11
CLOCKO15516 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLOCKO15516 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.71■□□□□ 0.11
CLOCKO15516 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.71■□□□□ 0.11
CLOCKO15516 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CLOCKO15516 NSUN5P1-202ENST00000421140 1535 ntBASIC15.71■□□□□ 0.11
CLOCKO15516 NSUN5P2-203ENST00000457352 1529 ntBASIC15.71■□□□□ 0.11
CLOCKO15516 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CLOCKO15516 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.71■□□□□ 0.11
CLOCKO15516 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
CLOCKO15516 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.71■□□□□ 0.11
CLOCKO15516 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLOCKO15516 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLOCKO15516 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.71■□□□□ 0.11
CLOCKO15516 AC002310.6-201ENST00000624451 1377 ntBASIC15.71■□□□□ 0.11
CLOCKO15516 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CLOCKO15516 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CLOCKO15516 GGT4P-201ENST00000623672 1708 ntBASIC15.71■□□□□ 0.1
CLOCKO15516 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.71■□□□□ 0.1
CLOCKO15516 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLOCKO15516 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CLOCKO15516 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.71■□□□□ 0.1
CLOCKO15516 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLOCKO15516 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.7■□□□□ 0.1
CLOCKO15516 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLOCKO15516 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLOCKO15516 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.7■□□□□ 0.1
CLOCKO15516 GGT3P-204ENST00000453783 1664 ntBASIC15.7■□□□□ 0.1
CLOCKO15516 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CLOCKO15516 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CLOCKO15516 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLOCKO15516 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLOCKO15516 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CLOCKO15516 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.7■□□□□ 0.1
CLOCKO15516 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
CLOCKO15516 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.7■□□□□ 0.1
CLOCKO15516 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLOCKO15516 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CLOCKO15516 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.7■□□□□ 0.1
CLOCKO15516 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLOCKO15516 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLOCKO15516 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CLOCKO15516 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLOCKO15516 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLOCKO15516 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.7■□□□□ 0.1
CLOCKO15516 KLF4P1-201ENST00000412782 1185 ntBASIC15.7■□□□□ 0.1
CLOCKO15516 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.7■□□□□ 0.1
CLOCKO15516 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.7■□□□□ 0.1
CLOCKO15516 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLOCKO15516 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLOCKO15516 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.7■□□□□ 0.1
CLOCKO15516 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
CLOCKO15516 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.7■□□□□ 0.1
CLOCKO15516 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLOCKO15516 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.7■□□□□ 0.1
CLOCKO15516 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.7■□□□□ 0.1
CLOCKO15516 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLOCKO15516 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CLOCKO15516 TNRC18P2-201ENST00000417666 2714 ntBASIC15.7■□□□□ 0.1
CLOCKO15516 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.7■□□□□ 0.1
CLOCKO15516 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.7■□□□□ 0.1
CLOCKO15516 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLOCKO15516 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLOCKO15516 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLOCKO15516 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CLOCKO15516 AC006058.4-201ENST00000624016 1670 ntBASIC15.7■□□□□ 0.1
CLOCKO15516 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLOCKO15516 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.7■□□□□ 0.1
CLOCKO15516 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLOCKO15516 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.69■□□□□ 0.1
CLOCKO15516 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.69■□□□□ 0.1
CLOCKO15516 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLOCKO15516 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.69■□□□□ 0.1
CLOCKO15516 AC006449.6-201ENST00000612330 2296 ntBASIC15.69■□□□□ 0.1
CLOCKO15516 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.69■□□□□ 0.1
CLOCKO15516 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLOCKO15516 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLOCKO15516 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms