Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NTN3O00634 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.39■□□□□ 0.05
NTN3O00634 AC005915.1-201ENST00000624912 2018 ntBASIC15.39■□□□□ 0.05
NTN3O00634 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NTN3O00634 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NTN3O00634 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NTN3O00634 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
NTN3O00634 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NTN3O00634 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NTN3O00634 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.38■□□□□ 0.05
NTN3O00634 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NTN3O00634 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NTN3O00634 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NTN3O00634 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
NTN3O00634 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NTN3O00634 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NTN3O00634 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NTN3O00634 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NTN3O00634 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.38■□□□□ 0.05
NTN3O00634 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NTN3O00634 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.38■□□□□ 0.05
NTN3O00634 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NTN3O00634 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NTN3O00634 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.38■□□□□ 0.05
NTN3O00634 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NTN3O00634 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NTN3O00634 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NTN3O00634 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NTN3O00634 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NTN3O00634 RN7SL399P-201ENST00000471648 279 ntBASIC15.38■□□□□ 0.05
NTN3O00634 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.38■□□□□ 0.05
NTN3O00634 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NTN3O00634 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NTN3O00634 AC008735.3-201ENST00000596646 500 ntBASIC15.38■□□□□ 0.05
NTN3O00634 LINC01115-203ENST00000606068 577 ntBASIC15.38■□□□□ 0.05
NTN3O00634 AL645608.8-201ENST00000606034 2086 ntBASIC15.38■□□□□ 0.05
NTN3O00634 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.38■□□□□ 0.05
NTN3O00634 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NTN3O00634 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NTN3O00634 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NTN3O00634 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.38■□□□□ 0.05
NTN3O00634 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NTN3O00634 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
NTN3O00634 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.38■□□□□ 0.05
NTN3O00634 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.38■□□□□ 0.05
NTN3O00634 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NTN3O00634 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NTN3O00634 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NTN3O00634 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NTN3O00634 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NTN3O00634 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NTN3O00634 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
NTN3O00634 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NTN3O00634 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NTN3O00634 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NTN3O00634 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NTN3O00634 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.37■□□□□ 0.05
NTN3O00634 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.37■□□□□ 0.05
NTN3O00634 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NTN3O00634 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NTN3O00634 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NTN3O00634 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.37■□□□□ 0.05
NTN3O00634 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NTN3O00634 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.37■□□□□ 0.05
NTN3O00634 RPL13P2-201ENST00000440687 659 ntBASIC15.37■□□□□ 0.05
NTN3O00634 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NTN3O00634 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.37■□□□□ 0.05
NTN3O00634 AC119751.2-201ENST00000504529 210 ntBASIC15.37■□□□□ 0.05
NTN3O00634 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NTN3O00634 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.37■□□□□ 0.05
NTN3O00634 MIR4259-201ENST00000584466 101 ntBASIC15.37■□□□□ 0.05
NTN3O00634 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
NTN3O00634 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
NTN3O00634 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
NTN3O00634 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.37■□□□□ 0.05
NTN3O00634 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
NTN3O00634 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NTN3O00634 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NTN3O00634 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NTN3O00634 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.37■□□□□ 0.05
NTN3O00634 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NTN3O00634 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NTN3O00634 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NTN3O00634 HLA-A-202ENST00000376806 1854 ntBASIC15.37■□□□□ 0.05
NTN3O00634 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.37■□□□□ 0.05
NTN3O00634 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NTN3O00634 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NTN3O00634 AL592424.1-201ENST00000563624 1536 ntBASIC15.37■□□□□ 0.05
NTN3O00634 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NTN3O00634 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NTN3O00634 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NTN3O00634 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
NTN3O00634 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.37■□□□□ 0.05
NTN3O00634 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NTN3O00634 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NTN3O00634 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NTN3O00634 LETM1P2-201ENST00000597330 2178 ntBASIC15.36■□□□□ 0.05
NTN3O00634 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NTN3O00634 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
NTN3O00634 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms