Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK2O00526 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.23□□□□□ -0.29
UPK2O00526 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.23□□□□□ -0.29
UPK2O00526 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.23□□□□□ -0.29
UPK2O00526 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK2O00526 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
UPK2O00526 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK2O00526 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
UPK2O00526 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
UPK2O00526 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
UPK2O00526 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK2O00526 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UPK2O00526 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.22□□□□□ -0.29
UPK2O00526 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK2O00526 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.22□□□□□ -0.29
UPK2O00526 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK2O00526 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
UPK2O00526 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
UPK2O00526 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK2O00526 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
UPK2O00526 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.22□□□□□ -0.29
UPK2O00526 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.22□□□□□ -0.29
UPK2O00526 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
UPK2O00526 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.22□□□□□ -0.29
UPK2O00526 AL160237.2-201ENST00000556165 472 ntBASIC13.22□□□□□ -0.29
UPK2O00526 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.22□□□□□ -0.29
UPK2O00526 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UPK2O00526 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UPK2O00526 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UPK2O00526 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK2O00526 AL592424.1-201ENST00000563624 1536 ntBASIC13.22□□□□□ -0.29
UPK2O00526 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
UPK2O00526 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK2O00526 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UPK2O00526 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.22□□□□□ -0.29
UPK2O00526 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.22□□□□□ -0.29
UPK2O00526 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK2O00526 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UPK2O00526 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK2O00526 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UPK2O00526 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK2O00526 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.21□□□□□ -0.29
UPK2O00526 PKD1P5-201ENST00000532415 10291 ntBASIC13.21□□□□□ -0.29
UPK2O00526 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.21□□□□□ -0.29
UPK2O00526 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK2O00526 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
UPK2O00526 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK2O00526 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK2O00526 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
UPK2O00526 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK2O00526 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UPK2O00526 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK2O00526 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
UPK2O00526 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.21□□□□□ -0.29
UPK2O00526 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.21□□□□□ -0.29
UPK2O00526 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.21□□□□□ -0.29
UPK2O00526 RNU1-129P-201ENST00000384064 167 ntBASIC13.21□□□□□ -0.29
UPK2O00526 HMGA1P7-201ENST00000406908 502 ntBASIC13.21□□□□□ -0.29
UPK2O00526 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.21□□□□□ -0.29
UPK2O00526 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.21□□□□□ -0.29
UPK2O00526 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
UPK2O00526 CXCL1P1-201ENST00000502804 216 ntBASIC13.21□□□□□ -0.29
UPK2O00526 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.21□□□□□ -0.29
UPK2O00526 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
UPK2O00526 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK2O00526 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.21□□□□□ -0.29
UPK2O00526 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
UPK2O00526 U1.21-201ENST00000580816 167 ntBASIC13.21□□□□□ -0.29
UPK2O00526 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
UPK2O00526 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UPK2O00526 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.21□□□□□ -0.29
UPK2O00526 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK2O00526 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK2O00526 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.21□□□□□ -0.29
UPK2O00526 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK2O00526 CDC14C-201ENST00000428251 1719 ntBASIC13.21□□□□□ -0.3
UPK2O00526 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
UPK2O00526 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
UPK2O00526 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UPK2O00526 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UPK2O00526 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.21□□□□□ -0.3
UPK2O00526 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UPK2O00526 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
UPK2O00526 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UPK2O00526 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.21□□□□□ -0.3
UPK2O00526 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
UPK2O00526 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.2□□□□□ -0.3
UPK2O00526 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.2□□□□□ -0.3
UPK2O00526 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.2□□□□□ -0.3
UPK2O00526 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.2□□□□□ -0.3
UPK2O00526 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms