Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
A0A1W2PRF3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
A0A1W2PRF3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
A0A1W2PRF3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
A0A1W2PRF3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
A0A1W2PRF3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
A0A1W2PRF3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
A0A1W2PRF3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
A0A1W2PRF3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
A0A1W2PRF3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
A0A1W2PRF3 AL592309.1-201ENST00000443127 649 ntBASIC13.57□□□□□ -0.24
A0A1W2PRF3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 AC022145.2-201ENST00000598203 171 ntBASIC13.57□□□□□ -0.24
A0A1W2PRF3 AC004835.2-201ENST00000603762 682 ntBASIC13.57□□□□□ -0.24
A0A1W2PRF3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
A0A1W2PRF3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 UXT-AS1-201ENST00000590504 1525 ntBASIC13.57□□□□□ -0.24
A0A1W2PRF3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
A0A1W2PRF3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.57□□□□□ -0.24
A0A1W2PRF3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
A0A1W2PRF3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 AC092171.3-201ENST00000610122 2651 ntBASIC13.56□□□□□ -0.24
A0A1W2PRF3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 AC092474.2-201ENST00000424288 719 ntBASIC13.56□□□□□ -0.24
A0A1W2PRF3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 AC079140.1-201ENST00000508039 487 ntBASIC13.56□□□□□ -0.24
A0A1W2PRF3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 IGHV3-62-201ENST00000520057 340 ntBASIC13.56□□□□□ -0.24
A0A1W2PRF3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 AC027612.4-201ENST00000605371 583 ntBASIC13.56□□□□□ -0.24
A0A1W2PRF3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.56□□□□□ -0.24
A0A1W2PRF3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
A0A1W2PRF3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms