Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV5-3A0A0A0MS03 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 AC136621.1-201ENST00000624017 2304 ntBASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 HAUS4P1-201ENST00000406739 1145 ntBASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 AC245100.5-201ENST00000452108 331 ntBASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 LINC01711-201ENST00000598340 967 ntBASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 AC005593.1-201ENST00000624894 515 ntBASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 AL645728.2-201ENST00000641974 660 ntBASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV5-3A0A0A0MS03 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 PRSS29P-201ENST00000440800 595 ntBASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 AL031432.2-201ENST00000566714 459 ntBASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 AL928711.1-201ENST00000570165 459 ntBASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 AC011477.6-201ENST00000604980 1927 ntBASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 TNRC18P2-201ENST00000417666 2714 ntBASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 AC023157.3-201ENST00000619086 2088 ntBASIC15.36■□□□□ 0.05
TRBV5-3A0A0A0MS03 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV5-3A0A0A0MS03 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.35■□□□□ 0.05
TRBV5-3A0A0A0MS03 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV5-3A0A0A0MS03 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV5-3A0A0A0MS03 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.35■□□□□ 0.05
TRBV5-3A0A0A0MS03 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV5-3A0A0A0MS03 AC092850.2-201ENST00000623821 2697 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms