Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM56-RWDD3S4R434 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM56-RWDD3S4R434 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM56-RWDD3S4R434 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
TMEM56-RWDD3S4R434 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TMEM56-RWDD3S4R434 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM56-RWDD3S4R434 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TMEM56-RWDD3S4R434 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM56-RWDD3S4R434 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM56-RWDD3S4R434 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.39■□□□□ 0.69
TMEM56-RWDD3S4R434 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM56-RWDD3S4R434 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM56-RWDD3S4R434 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM56-RWDD3S4R434 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM56-RWDD3S4R434 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TMEM56-RWDD3S4R434 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TMEM56-RWDD3S4R434 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM56-RWDD3S4R434 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM56-RWDD3S4R434 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM56-RWDD3S4R434 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM56-RWDD3S4R434 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.38■□□□□ 0.69
TMEM56-RWDD3S4R434 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.38■□□□□ 0.69
TMEM56-RWDD3S4R434 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.38■□□□□ 0.69
TMEM56-RWDD3S4R434 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.38■□□□□ 0.69
TMEM56-RWDD3S4R434 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.38■□□□□ 0.69
TMEM56-RWDD3S4R434 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM56-RWDD3S4R434 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM56-RWDD3S4R434 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM56-RWDD3S4R434 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM56-RWDD3S4R434 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM56-RWDD3S4R434 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM56-RWDD3S4R434 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM56-RWDD3S4R434 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM56-RWDD3S4R434 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TMEM56-RWDD3S4R434 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM56-RWDD3S4R434 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.36■□□□□ 0.69
TMEM56-RWDD3S4R434 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM56-RWDD3S4R434 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM56-RWDD3S4R434 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.36■□□□□ 0.69
TMEM56-RWDD3S4R434 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.36■□□□□ 0.69
TMEM56-RWDD3S4R434 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM56-RWDD3S4R434 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.36■□□□□ 0.69
TMEM56-RWDD3S4R434 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM56-RWDD3S4R434 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM56-RWDD3S4R434 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM56-RWDD3S4R434 DUSP8P5-201ENST00000422884 1815 ntBASIC19.35■□□□□ 0.69
TMEM56-RWDD3S4R434 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEM56-RWDD3S4R434 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM56-RWDD3S4R434 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEM56-RWDD3S4R434 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TMEM56-RWDD3S4R434 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TMEM56-RWDD3S4R434 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM56-RWDD3S4R434 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM56-RWDD3S4R434 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM56-RWDD3S4R434 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM56-RWDD3S4R434 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TMEM56-RWDD3S4R434 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM56-RWDD3S4R434 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM56-RWDD3S4R434 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM56-RWDD3S4R434 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
TMEM56-RWDD3S4R434 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM56-RWDD3S4R434 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TMEM56-RWDD3S4R434 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM56-RWDD3S4R434 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
TMEM56-RWDD3S4R434 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TMEM56-RWDD3S4R434 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM56-RWDD3S4R434 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM56-RWDD3S4R434 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.33■□□□□ 0.68
TMEM56-RWDD3S4R434 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.33■□□□□ 0.68
TMEM56-RWDD3S4R434 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM56-RWDD3S4R434 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.33■□□□□ 0.68
TMEM56-RWDD3S4R434 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.33■□□□□ 0.68
TMEM56-RWDD3S4R434 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM56-RWDD3S4R434 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM56-RWDD3S4R434 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM56-RWDD3S4R434 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.33■□□□□ 0.68
TMEM56-RWDD3S4R434 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEM56-RWDD3S4R434 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEM56-RWDD3S4R434 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TMEM56-RWDD3S4R434 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
TMEM56-RWDD3S4R434 HLA-V-202ENST00000446817 847 ntBASIC19.32■□□□□ 0.68
TMEM56-RWDD3S4R434 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM56-RWDD3S4R434 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM56-RWDD3S4R434 AC004812.2-201ENST00000611079 2094 ntBASIC19.32■□□□□ 0.68
TMEM56-RWDD3S4R434 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM56-RWDD3S4R434 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM56-RWDD3S4R434 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM56-RWDD3S4R434 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM56-RWDD3S4R434 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.31■□□□□ 0.68
TMEM56-RWDD3S4R434 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM56-RWDD3S4R434 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM56-RWDD3S4R434 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM56-RWDD3S4R434 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM56-RWDD3S4R434 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM56-RWDD3S4R434 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM56-RWDD3S4R434 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
TMEM56-RWDD3S4R434 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM56-RWDD3S4R434 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM56-RWDD3S4R434 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TMEM56-RWDD3S4R434 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms