Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LSM4Q9Y4Z0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM4Q9Y4Z0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM4Q9Y4Z0 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.91■□□□□ 0.62
LSM4Q9Y4Z0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.91■□□□□ 0.62
LSM4Q9Y4Z0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LSM4Q9Y4Z0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM4Q9Y4Z0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM4Q9Y4Z0 MIR219A2-201ENST00000608502 1504 ntBASIC18.91■□□□□ 0.62
LSM4Q9Y4Z0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
LSM4Q9Y4Z0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LSM4Q9Y4Z0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM4Q9Y4Z0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM4Q9Y4Z0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM4Q9Y4Z0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.9■□□□□ 0.62
LSM4Q9Y4Z0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM4Q9Y4Z0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.9■□□□□ 0.62
LSM4Q9Y4Z0 AC092296.2-201ENST00000589470 999 ntBASIC18.9■□□□□ 0.62
LSM4Q9Y4Z0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.9■□□□□ 0.62
LSM4Q9Y4Z0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM4Q9Y4Z0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM4Q9Y4Z0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.9■□□□□ 0.62
LSM4Q9Y4Z0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LSM4Q9Y4Z0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LSM4Q9Y4Z0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
LSM4Q9Y4Z0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM4Q9Y4Z0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.89■□□□□ 0.61
LSM4Q9Y4Z0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM4Q9Y4Z0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.89■□□□□ 0.61
LSM4Q9Y4Z0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LSM4Q9Y4Z0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.89■□□□□ 0.61
LSM4Q9Y4Z0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.89■□□□□ 0.61
LSM4Q9Y4Z0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM4Q9Y4Z0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM4Q9Y4Z0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LSM4Q9Y4Z0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM4Q9Y4Z0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LSM4Q9Y4Z0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LSM4Q9Y4Z0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM4Q9Y4Z0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LSM4Q9Y4Z0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM4Q9Y4Z0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LSM4Q9Y4Z0 AP003733.4-201ENST00000623785 1697 ntBASIC18.88■□□□□ 0.61
LSM4Q9Y4Z0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM4Q9Y4Z0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LSM4Q9Y4Z0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM4Q9Y4Z0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM4Q9Y4Z0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM4Q9Y4Z0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LSM4Q9Y4Z0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.86■□□□□ 0.61
LSM4Q9Y4Z0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM4Q9Y4Z0 ECEL1P2-201ENST00000461596 1295 ntBASIC18.86■□□□□ 0.61
LSM4Q9Y4Z0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.86■□□□□ 0.61
LSM4Q9Y4Z0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
LSM4Q9Y4Z0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM4Q9Y4Z0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.86■□□□□ 0.61
LSM4Q9Y4Z0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM4Q9Y4Z0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
LSM4Q9Y4Z0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM4Q9Y4Z0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM4Q9Y4Z0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM4Q9Y4Z0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM4Q9Y4Z0 LINC01124-201ENST00000409786 2117 ntBASIC18.85■□□□□ 0.61
LSM4Q9Y4Z0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.85■□□□□ 0.61
LSM4Q9Y4Z0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LSM4Q9Y4Z0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM4Q9Y4Z0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.85■□□□□ 0.61
LSM4Q9Y4Z0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM4Q9Y4Z0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM4Q9Y4Z0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM4Q9Y4Z0 KRT18P60-201ENST00000312876 1297 ntBASIC18.84■□□□□ 0.61
LSM4Q9Y4Z0 TSPY13P-201ENST00000338964 914 ntBASIC18.84■□□□□ 0.61
LSM4Q9Y4Z0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.84■□□□□ 0.61
LSM4Q9Y4Z0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LSM4Q9Y4Z0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LSM4Q9Y4Z0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.84■□□□□ 0.61
LSM4Q9Y4Z0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LSM4Q9Y4Z0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM4Q9Y4Z0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM4Q9Y4Z0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM4Q9Y4Z0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM4Q9Y4Z0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
LSM4Q9Y4Z0 AL359504.2-201ENST00000605506 1601 ntBASIC18.83■□□□□ 0.61
LSM4Q9Y4Z0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LSM4Q9Y4Z0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LSM4Q9Y4Z0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LSM4Q9Y4Z0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSM4Q9Y4Z0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSM4Q9Y4Z0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSM4Q9Y4Z0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LSM4Q9Y4Z0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
LSM4Q9Y4Z0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.82■□□□□ 0.6
LSM4Q9Y4Z0 AC004987.1-201ENST00000428627 508 ntBASIC18.82■□□□□ 0.6
LSM4Q9Y4Z0 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.82■□□□□ 0.6
LSM4Q9Y4Z0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.82■□□□□ 0.6
LSM4Q9Y4Z0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSM4Q9Y4Z0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSM4Q9Y4Z0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LSM4Q9Y4Z0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.81■□□□□ 0.6
LSM4Q9Y4Z0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms