Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AL355802.2-201ENST00000402069 882 ntBASIC10.14□□□□□ -0.79
MACF1Q9UPN3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
MACF1Q9UPN3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
MACF1Q9UPN3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
MACF1Q9UPN3 SP2-202ENST00000613139 908 ntTSL 5 BASIC10.14□□□□□ -0.79
MACF1Q9UPN3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
MACF1Q9UPN3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
MACF1Q9UPN3 IRS3P-201ENST00000223076 1006 ntBASIC10.13□□□□□ -0.79
MACF1Q9UPN3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC10.13□□□□□ -0.79
MACF1Q9UPN3 SRD5A1P1-201ENST00000442297 786 ntBASIC10.13□□□□□ -0.79
MACF1Q9UPN3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
MACF1Q9UPN3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC10.13□□□□□ -0.79
MACF1Q9UPN3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
MACF1Q9UPN3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
MACF1Q9UPN3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
MACF1Q9UPN3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC10.13□□□□□ -0.79
MACF1Q9UPN3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
MACF1Q9UPN3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
MACF1Q9UPN3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC10.13□□□□□ -0.79
MACF1Q9UPN3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
MACF1Q9UPN3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC10.13□□□□□ -0.79
MACF1Q9UPN3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
MACF1Q9UPN3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC10.12□□□□□ -0.79
MACF1Q9UPN3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
MACF1Q9UPN3 MAP2K4P1-201ENST00000438453 1195 ntBASIC10.12□□□□□ -0.79
MACF1Q9UPN3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
MACF1Q9UPN3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC10.12□□□□□ -0.79
MACF1Q9UPN3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
MACF1Q9UPN3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
MACF1Q9UPN3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC10.11□□□□□ -0.79
MACF1Q9UPN3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC10.11□□□□□ -0.79
MACF1Q9UPN3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
MACF1Q9UPN3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC10.11□□□□□ -0.79
MACF1Q9UPN3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
MACF1Q9UPN3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
MACF1Q9UPN3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
MACF1Q9UPN3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
MACF1Q9UPN3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
MACF1Q9UPN3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC10.11□□□□□ -0.79
MACF1Q9UPN3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
MACF1Q9UPN3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
MACF1Q9UPN3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
MACF1Q9UPN3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC10.1□□□□□ -0.79
MACF1Q9UPN3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC10.1□□□□□ -0.79
MACF1Q9UPN3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC10.1□□□□□ -0.79
MACF1Q9UPN3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC10.1□□□□□ -0.79
MACF1Q9UPN3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
MACF1Q9UPN3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
MACF1Q9UPN3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC10.1□□□□□ -0.79
MACF1Q9UPN3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC10.09□□□□□ -0.79
MACF1Q9UPN3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
MACF1Q9UPN3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
MACF1Q9UPN3 AC027682.1-201ENST00000562846 899 ntBASIC10.09□□□□□ -0.79
MACF1Q9UPN3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC10.09□□□□□ -0.79
MACF1Q9UPN3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC10.09□□□□□ -0.79
MACF1Q9UPN3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC10.09□□□□□ -0.79
MACF1Q9UPN3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
MACF1Q9UPN3 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
MACF1Q9UPN3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC10.09□□□□□ -0.79
MACF1Q9UPN3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
MACF1Q9UPN3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
MACF1Q9UPN3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC10.09□□□□□ -0.79
MACF1Q9UPN3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
MACF1Q9UPN3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
MACF1Q9UPN3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC10.08□□□□□ -0.8
MACF1Q9UPN3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
MACF1Q9UPN3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
MACF1Q9UPN3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC10.08□□□□□ -0.8
MACF1Q9UPN3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
MACF1Q9UPN3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC10.08□□□□□ -0.8
MACF1Q9UPN3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC10.08□□□□□ -0.8
MACF1Q9UPN3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
MACF1Q9UPN3 SF1-220ENST00000626028 704 ntTSL 2 BASIC10.08□□□□□ -0.8
MACF1Q9UPN3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
MACF1Q9UPN3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
MACF1Q9UPN3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC10.07□□□□□ -0.8
MACF1Q9UPN3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
MACF1Q9UPN3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC10.07□□□□□ -0.8
MACF1Q9UPN3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
MACF1Q9UPN3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC10.07□□□□□ -0.8
MACF1Q9UPN3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC10.07□□□□□ -0.8
MACF1Q9UPN3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
MACF1Q9UPN3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
MACF1Q9UPN3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
MACF1Q9UPN3 CDCA4P2-201ENST00000441182 718 ntBASIC10.07□□□□□ -0.8
MACF1Q9UPN3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
MACF1Q9UPN3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
MACF1Q9UPN3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
MACF1Q9UPN3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC10.06□□□□□ -0.8
MACF1Q9UPN3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
MACF1Q9UPN3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
MACF1Q9UPN3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC10.06□□□□□ -0.8
MACF1Q9UPN3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
MACF1Q9UPN3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC10.06□□□□□ -0.8
MACF1Q9UPN3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
MACF1Q9UPN3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC10.06□□□□□ -0.8
MACF1Q9UPN3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC10.06□□□□□ -0.8
MACF1Q9UPN3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
MACF1Q9UPN3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
MACF1Q9UPN3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms