Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC27.32■■□□□ 1.96
PCDHA6Q9UN73 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHA6Q9UN73 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC27.31■■□□□ 1.96
PCDHA6Q9UN73 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHA6Q9UN73 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC27.31■■□□□ 1.96
PCDHA6Q9UN73 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC27.31■■□□□ 1.96
PCDHA6Q9UN73 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHA6Q9UN73 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHA6Q9UN73 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHA6Q9UN73 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHA6Q9UN73 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA6Q9UN73 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
PCDHA6Q9UN73 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA6Q9UN73 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC27.3■■□□□ 1.96
PCDHA6Q9UN73 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA6Q9UN73 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA6Q9UN73 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC27.3■■□□□ 1.96
PCDHA6Q9UN73 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC27.29■■□□□ 1.96
PCDHA6Q9UN73 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC27.29■■□□□ 1.96
PCDHA6Q9UN73 AC019171.1-201ENST00000601251 1056 ntBASIC27.29■■□□□ 1.96
PCDHA6Q9UN73 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHA6Q9UN73 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC27.29■■□□□ 1.96
PCDHA6Q9UN73 KRT8P33-201ENST00000508125 1423 ntBASIC27.28■■□□□ 1.96
PCDHA6Q9UN73 AC103834.1-201ENST00000520383 144 ntBASIC27.28■■□□□ 1.96
PCDHA6Q9UN73 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC27.28■■□□□ 1.96
PCDHA6Q9UN73 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHA6Q9UN73 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHA6Q9UN73 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA6Q9UN73 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA6Q9UN73 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC27.27■■□□□ 1.96
PCDHA6Q9UN73 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA6Q9UN73 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA6Q9UN73 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC27.27■■□□□ 1.96
PCDHA6Q9UN73 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA6Q9UN73 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHA6Q9UN73 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHA6Q9UN73 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA6Q9UN73 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC27.25■■□□□ 1.95
PCDHA6Q9UN73 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA6Q9UN73 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA6Q9UN73 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA6Q9UN73 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA6Q9UN73 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA6Q9UN73 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA6Q9UN73 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA6Q9UN73 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA6Q9UN73 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA6Q9UN73 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA6Q9UN73 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA6Q9UN73 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
PCDHA6Q9UN73 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHA6Q9UN73 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHA6Q9UN73 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
PCDHA6Q9UN73 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
PCDHA6Q9UN73 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHA6Q9UN73 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHA6Q9UN73 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHA6Q9UN73 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC27.22■■□□□ 1.95
PCDHA6Q9UN73 MIR4508-201ENST00000584178 70 ntBASIC27.22■■□□□ 1.95
PCDHA6Q9UN73 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHA6Q9UN73 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC27.22■■□□□ 1.95
PCDHA6Q9UN73 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHA6Q9UN73 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA6Q9UN73 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA6Q9UN73 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
PCDHA6Q9UN73 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA6Q9UN73 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC27.21■■□□□ 1.95
PCDHA6Q9UN73 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA6Q9UN73 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA6Q9UN73 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA6Q9UN73 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC27.21■■□□□ 1.95
PCDHA6Q9UN73 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PCDHA6Q9UN73 CEBPA-AS1-201ENST00000592982 2198 ntBASIC27.2■■□□□ 1.94
PCDHA6Q9UN73 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC27.2■■□□□ 1.94
PCDHA6Q9UN73 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC27.2■■□□□ 1.94
PCDHA6Q9UN73 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA6Q9UN73 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.19■■□□□ 1.94
PCDHA6Q9UN73 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA6Q9UN73 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA6Q9UN73 YBX1P4-201ENST00000392794 808 ntBASIC27.19■■□□□ 1.94
PCDHA6Q9UN73 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
PCDHA6Q9UN73 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA6Q9UN73 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
PCDHA6Q9UN73 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHA6Q9UN73 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC27.18■■□□□ 1.94
PCDHA6Q9UN73 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
PCDHA6Q9UN73 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA6Q9UN73 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC27.17■■□□□ 1.94
PCDHA6Q9UN73 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC27.17■■□□□ 1.94
PCDHA6Q9UN73 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC27.17■■□□□ 1.94
PCDHA6Q9UN73 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
PCDHA6Q9UN73 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC27.17■■□□□ 1.94
PCDHA6Q9UN73 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC27.17■■□□□ 1.94
PCDHA6Q9UN73 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA6Q9UN73 AC020928.2-201ENST00000588717 2197 ntBASIC27.16■■□□□ 1.94
PCDHA6Q9UN73 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHA6Q9UN73 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHA6Q9UN73 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHA6Q9UN73 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHA6Q9UN73 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms