Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.82■■□□□ 1.24
PCDHGB4Q9UN71 AC142381.3-201ENST00000568208 1670 ntBASIC22.82■■□□□ 1.24
PCDHGB4Q9UN71 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGB4Q9UN71 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDHGB4Q9UN71 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
PCDHGB4Q9UN71 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGB4Q9UN71 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDHGB4Q9UN71 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGB4Q9UN71 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDHGB4Q9UN71 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
PCDHGB4Q9UN71 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGB4Q9UN71 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGB4Q9UN71 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGB4Q9UN71 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGB4Q9UN71 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGB4Q9UN71 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGB4Q9UN71 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.8■■□□□ 1.24
PCDHGB4Q9UN71 AC012676.1-201ENST00000574705 1949 ntBASIC22.8■■□□□ 1.24
PCDHGB4Q9UN71 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGB4Q9UN71 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGB4Q9UN71 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
PCDHGB4Q9UN71 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.79■■□□□ 1.24
PCDHGB4Q9UN71 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGB4Q9UN71 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
PCDHGB4Q9UN71 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGB4Q9UN71 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
PCDHGB4Q9UN71 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGB4Q9UN71 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.78■■□□□ 1.24
PCDHGB4Q9UN71 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
PCDHGB4Q9UN71 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGB4Q9UN71 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDHGB4Q9UN71 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGB4Q9UN71 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGB4Q9UN71 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.78■■□□□ 1.24
PCDHGB4Q9UN71 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGB4Q9UN71 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGB4Q9UN71 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDHGB4Q9UN71 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.77■■□□□ 1.24
PCDHGB4Q9UN71 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
PCDHGB4Q9UN71 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.77■■□□□ 1.24
PCDHGB4Q9UN71 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
PCDHGB4Q9UN71 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGB4Q9UN71 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.23
PCDHGB4Q9UN71 AC068473.5-201ENST00000616428 2072 ntBASIC22.77■■□□□ 1.23
PCDHGB4Q9UN71 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
PCDHGB4Q9UN71 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
PCDHGB4Q9UN71 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
PCDHGB4Q9UN71 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.76■■□□□ 1.23
PCDHGB4Q9UN71 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGB4Q9UN71 AC096887.2-201ENST00000623443 1957 ntBASIC22.76■■□□□ 1.23
PCDHGB4Q9UN71 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGB4Q9UN71 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.75■■□□□ 1.23
PCDHGB4Q9UN71 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGB4Q9UN71 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.75■■□□□ 1.23
PCDHGB4Q9UN71 MIR7108-201ENST00000614319 87 ntBASIC22.75■■□□□ 1.23
PCDHGB4Q9UN71 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGB4Q9UN71 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGB4Q9UN71 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGB4Q9UN71 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGB4Q9UN71 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGB4Q9UN71 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGB4Q9UN71 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGB4Q9UN71 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGB4Q9UN71 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGB4Q9UN71 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.73■■□□□ 1.23
PCDHGB4Q9UN71 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGB4Q9UN71 AC022211.4-201ENST00000625094 2161 ntBASIC22.73■■□□□ 1.23
PCDHGB4Q9UN71 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGB4Q9UN71 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.73■■□□□ 1.23
PCDHGB4Q9UN71 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.73■■□□□ 1.23
PCDHGB4Q9UN71 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.73■■□□□ 1.23
PCDHGB4Q9UN71 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
PCDHGB4Q9UN71 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGB4Q9UN71 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.73■■□□□ 1.23
PCDHGB4Q9UN71 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.73■■□□□ 1.23
PCDHGB4Q9UN71 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGB4Q9UN71 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGB4Q9UN71 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGB4Q9UN71 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGB4Q9UN71 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGB4Q9UN71 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.71■■□□□ 1.23
PCDHGB4Q9UN71 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGB4Q9UN71 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDHGB4Q9UN71 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGB4Q9UN71 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
PCDHGB4Q9UN71 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGB4Q9UN71 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGB4Q9UN71 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGB4Q9UN71 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGB4Q9UN71 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGB4Q9UN71 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGB4Q9UN71 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGB4Q9UN71 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGB4Q9UN71 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGB4Q9UN71 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
PCDHGB4Q9UN71 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGB4Q9UN71 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGB4Q9UN71 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGB4Q9UN71 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGB4Q9UN71 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms