Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COMMD3Q9UBI1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COMMD3Q9UBI1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COMMD3Q9UBI1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
COMMD3Q9UBI1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.79■□□□□ 0.92
COMMD3Q9UBI1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COMMD3Q9UBI1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COMMD3Q9UBI1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
COMMD3Q9UBI1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.79■□□□□ 0.92
COMMD3Q9UBI1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COMMD3Q9UBI1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COMMD3Q9UBI1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD3Q9UBI1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD3Q9UBI1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD3Q9UBI1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD3Q9UBI1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD3Q9UBI1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.78■□□□□ 0.92
COMMD3Q9UBI1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
COMMD3Q9UBI1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD3Q9UBI1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD3Q9UBI1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD3Q9UBI1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD3Q9UBI1 AC097358.2-201ENST00000607541 1159 ntBASIC20.77■□□□□ 0.92
COMMD3Q9UBI1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD3Q9UBI1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD3Q9UBI1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD3Q9UBI1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
COMMD3Q9UBI1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
COMMD3Q9UBI1 AC141586.4-201ENST00000624558 1573 ntBASIC20.76■□□□□ 0.91
COMMD3Q9UBI1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD3Q9UBI1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD3Q9UBI1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD3Q9UBI1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD3Q9UBI1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD3Q9UBI1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COMMD3Q9UBI1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.75■□□□□ 0.91
COMMD3Q9UBI1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COMMD3Q9UBI1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COMMD3Q9UBI1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COMMD3Q9UBI1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COMMD3Q9UBI1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COMMD3Q9UBI1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COMMD3Q9UBI1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.75■□□□□ 0.91
COMMD3Q9UBI1 SLC6A10P-202ENST00000431994 2058 ntBASIC20.74■□□□□ 0.91
COMMD3Q9UBI1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD3Q9UBI1 C9orf163-202ENST00000624034 2573 ntBASIC20.74■□□□□ 0.91
COMMD3Q9UBI1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
COMMD3Q9UBI1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.74■□□□□ 0.91
COMMD3Q9UBI1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD3Q9UBI1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3Q9UBI1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3Q9UBI1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3Q9UBI1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
COMMD3Q9UBI1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
COMMD3Q9UBI1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.73■□□□□ 0.91
COMMD3Q9UBI1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3Q9UBI1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3Q9UBI1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3Q9UBI1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3Q9UBI1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3Q9UBI1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
COMMD3Q9UBI1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.72■□□□□ 0.91
COMMD3Q9UBI1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COMMD3Q9UBI1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
COMMD3Q9UBI1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
COMMD3Q9UBI1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD3Q9UBI1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD3Q9UBI1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.71■□□□□ 0.91
COMMD3Q9UBI1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD3Q9UBI1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
COMMD3Q9UBI1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD3Q9UBI1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD3Q9UBI1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD3Q9UBI1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD3Q9UBI1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD3Q9UBI1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
COMMD3Q9UBI1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COMMD3Q9UBI1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
COMMD3Q9UBI1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COMMD3Q9UBI1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COMMD3Q9UBI1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COMMD3Q9UBI1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COMMD3Q9UBI1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COMMD3Q9UBI1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD3Q9UBI1 AC004812.2-201ENST00000611079 2094 ntBASIC20.69■□□□□ 0.9
COMMD3Q9UBI1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD3Q9UBI1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD3Q9UBI1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.69■□□□□ 0.9
COMMD3Q9UBI1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD3Q9UBI1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD3Q9UBI1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD3Q9UBI1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
COMMD3Q9UBI1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.68■□□□□ 0.9
COMMD3Q9UBI1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COMMD3Q9UBI1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COMMD3Q9UBI1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.68■□□□□ 0.9
COMMD3Q9UBI1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COMMD3Q9UBI1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.68■□□□□ 0.9
COMMD3Q9UBI1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COMMD3Q9UBI1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms