Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD9Q9P000 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD9Q9P000 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD9Q9P000 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.02■□□□□ 0.8
COMMD9Q9P000 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.02■□□□□ 0.8
COMMD9Q9P000 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD9Q9P000 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD9Q9P000 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD9Q9P000 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
COMMD9Q9P000 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.01■□□□□ 0.79
COMMD9Q9P000 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD9Q9P000 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD9Q9P000 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD9Q9P000 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD9Q9P000 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD9Q9P000 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD9Q9P000 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
COMMD9Q9P000 LINC01124-201ENST00000409786 2117 ntBASIC20.01■□□□□ 0.79
COMMD9Q9P000 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.01■□□□□ 0.79
COMMD9Q9P000 AC021231.2-201ENST00000594613 730 ntBASIC20.01■□□□□ 0.79
COMMD9Q9P000 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
COMMD9Q9P000 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD9Q9P000 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD9Q9P000 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.01■□□□□ 0.79
COMMD9Q9P000 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD9Q9P000 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20■□□□□ 0.79
COMMD9Q9P000 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD9Q9P000 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20■□□□□ 0.79
COMMD9Q9P000 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
COMMD9Q9P000 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20■□□□□ 0.79
COMMD9Q9P000 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD9Q9P000 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20■□□□□ 0.79
COMMD9Q9P000 DUX4L29-201ENST00000425409 679 ntBASIC20■□□□□ 0.79
COMMD9Q9P000 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20■□□□□ 0.79
COMMD9Q9P000 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20■□□□□ 0.79
COMMD9Q9P000 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20■□□□□ 0.79
COMMD9Q9P000 AC097639.1-201ENST00000565519 1891 ntBASIC20■□□□□ 0.79
COMMD9Q9P000 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD9Q9P000 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD9Q9P000 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD9Q9P000 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD9Q9P000 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD9Q9P000 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.99■□□□□ 0.79
COMMD9Q9P000 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.99■□□□□ 0.79
COMMD9Q9P000 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD9Q9P000 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD9Q9P000 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD9Q9P000 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.99■□□□□ 0.79
COMMD9Q9P000 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
COMMD9Q9P000 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.98■□□□□ 0.79
COMMD9Q9P000 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD9Q9P000 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD9Q9P000 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD9Q9P000 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD9Q9P000 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COMMD9Q9P000 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.97■□□□□ 0.79
COMMD9Q9P000 CLDN5-201ENST00000403084 2357 ntBASIC19.97■□□□□ 0.79
COMMD9Q9P000 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.97■□□□□ 0.79
COMMD9Q9P000 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COMMD9Q9P000 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD9Q9P000 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
COMMD9Q9P000 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD9Q9P000 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
COMMD9Q9P000 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD9Q9P000 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD9Q9P000 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD9Q9P000 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD9Q9P000 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.95■□□□□ 0.78
COMMD9Q9P000 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD9Q9P000 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD9Q9P000 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD9Q9P000 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD9Q9P000 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
COMMD9Q9P000 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COMMD9Q9P000 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.94■□□□□ 0.78
COMMD9Q9P000 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.94■□□□□ 0.78
COMMD9Q9P000 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.94■□□□□ 0.78
COMMD9Q9P000 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD9Q9P000 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD9Q9P000 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
COMMD9Q9P000 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD9Q9P000 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD9Q9P000 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD9Q9P000 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.93■□□□□ 0.78
COMMD9Q9P000 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD9Q9P000 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD9Q9P000 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD9Q9P000 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD9Q9P000 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
COMMD9Q9P000 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD9Q9P000 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.92■□□□□ 0.78
COMMD9Q9P000 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.92■□□□□ 0.78
COMMD9Q9P000 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.92■□□□□ 0.78
COMMD9Q9P000 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
COMMD9Q9P000 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.92■□□□□ 0.78
COMMD9Q9P000 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD9Q9P000 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD9Q9P000 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD9Q9P000 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD9Q9P000 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms