Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
SLC52A1Q9NWF4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
SLC52A1Q9NWF4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC34.68■■■■□ 3.14
SLC52A1Q9NWF4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC34.67■■■■□ 3.14
SLC52A1Q9NWF4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
SLC52A1Q9NWF4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC34.67■■■■□ 3.14
SLC52A1Q9NWF4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
SLC52A1Q9NWF4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
SLC52A1Q9NWF4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC34.67■■■■□ 3.14
SLC52A1Q9NWF4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC34.67■■■■□ 3.14
SLC52A1Q9NWF4 MTDHP2-201ENST00000601468 714 ntBASIC34.67■■■■□ 3.14
SLC52A1Q9NWF4 GAK-223ENST00000628912 497 ntTSL 5 BASIC34.67■■■■□ 3.14
SLC52A1Q9NWF4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC34.66■■■■□ 3.14
SLC52A1Q9NWF4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
SLC52A1Q9NWF4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
SLC52A1Q9NWF4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC34.65■■■■□ 3.14
SLC52A1Q9NWF4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC34.65■■■■□ 3.14
SLC52A1Q9NWF4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC34.65■■■■□ 3.14
SLC52A1Q9NWF4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
SLC52A1Q9NWF4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
SLC52A1Q9NWF4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC34.64■■■■□ 3.14
SLC52A1Q9NWF4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC34.64■■■■□ 3.14
SLC52A1Q9NWF4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC34.64■■■■□ 3.14
SLC52A1Q9NWF4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC34.64■■■■□ 3.14
SLC52A1Q9NWF4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC34.64■■■■□ 3.14
SLC52A1Q9NWF4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC34.63■■■■□ 3.13
SLC52A1Q9NWF4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
SLC52A1Q9NWF4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC34.63■■■■□ 3.13
SLC52A1Q9NWF4 AL356740.2-201ENST00000601559 647 ntBASIC34.63■■■■□ 3.13
SLC52A1Q9NWF4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC34.62■■■■□ 3.13
SLC52A1Q9NWF4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC34.62■■■■□ 3.13
SLC52A1Q9NWF4 MIR4466-201ENST00000606121 54 ntBASIC34.62■■■■□ 3.13
SLC52A1Q9NWF4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
SLC52A1Q9NWF4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC34.61■■■■□ 3.13
SLC52A1Q9NWF4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
SLC52A1Q9NWF4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC34.61■■■■□ 3.13
SLC52A1Q9NWF4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC34.61■■■■□ 3.13
SLC52A1Q9NWF4 AP004609.3-201ENST00000610705 1884 ntBASIC34.61■■■■□ 3.13
SLC52A1Q9NWF4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
SLC52A1Q9NWF4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
SLC52A1Q9NWF4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC34.6■■■■□ 3.13
SLC52A1Q9NWF4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC34.59■■■■□ 3.13
SLC52A1Q9NWF4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
SLC52A1Q9NWF4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC34.59■■■■□ 3.13
SLC52A1Q9NWF4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC34.59■■■■□ 3.13
SLC52A1Q9NWF4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC34.59■■■■□ 3.13
SLC52A1Q9NWF4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
SLC52A1Q9NWF4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC34.58■■■■□ 3.13
SLC52A1Q9NWF4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
SLC52A1Q9NWF4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC34.58■■■■□ 3.13
SLC52A1Q9NWF4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC34.58■■■■□ 3.13
SLC52A1Q9NWF4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC34.58■■■■□ 3.13
SLC52A1Q9NWF4 AC133561.4-201ENST00000566112 224 ntBASIC34.58■■■■□ 3.13
SLC52A1Q9NWF4 AL512631.2-201ENST00000604634 923 ntBASIC34.58■■■■□ 3.13
SLC52A1Q9NWF4 AC005837.3-201ENST00000612163 286 ntBASIC34.58■■■■□ 3.13
SLC52A1Q9NWF4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC34.58■■■■□ 3.13
SLC52A1Q9NWF4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
SLC52A1Q9NWF4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC34.57■■■■□ 3.12
SLC52A1Q9NWF4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC34.56■■■■□ 3.12
SLC52A1Q9NWF4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC34.56■■■■□ 3.12
SLC52A1Q9NWF4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
SLC52A1Q9NWF4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC34.55■■■■□ 3.12
SLC52A1Q9NWF4 AC096631.2-201ENST00000436136 790 ntBASIC34.55■■■■□ 3.12
SLC52A1Q9NWF4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC34.55■■■■□ 3.12
SLC52A1Q9NWF4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC34.55■■■■□ 3.12
SLC52A1Q9NWF4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
SLC52A1Q9NWF4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC34.55■■■■□ 3.12
SLC52A1Q9NWF4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC34.55■■■■□ 3.12
SLC52A1Q9NWF4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
SLC52A1Q9NWF4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC34.55■■■■□ 3.12
SLC52A1Q9NWF4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC34.54■■■■□ 3.12
SLC52A1Q9NWF4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC34.54■■■■□ 3.12
SLC52A1Q9NWF4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
SLC52A1Q9NWF4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC34.54■■■■□ 3.12
SLC52A1Q9NWF4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC34.54■■■■□ 3.12
SLC52A1Q9NWF4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC34.54■■■■□ 3.12
SLC52A1Q9NWF4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC34.53■■■■□ 3.12
SLC52A1Q9NWF4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
SLC52A1Q9NWF4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
SLC52A1Q9NWF4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC34.52■■■■□ 3.12
SLC52A1Q9NWF4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
SLC52A1Q9NWF4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC34.52■■■■□ 3.12
SLC52A1Q9NWF4 AC139426.1-201ENST00000568218 2529 ntBASIC34.51■■■■□ 3.12
SLC52A1Q9NWF4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC34.51■■■■□ 3.12
SLC52A1Q9NWF4 AF131216.4-201ENST00000638924 1588 ntBASIC34.51■■■■□ 3.12
SLC52A1Q9NWF4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC34.5■■■■□ 3.11
SLC52A1Q9NWF4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC34.5■■■■□ 3.11
SLC52A1Q9NWF4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC34.49■■■■□ 3.11
SLC52A1Q9NWF4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC34.49■■■■□ 3.11
SLC52A1Q9NWF4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC34.49■■■■□ 3.11
SLC52A1Q9NWF4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC34.49■■■■□ 3.11
SLC52A1Q9NWF4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC34.49■■■■□ 3.11
SLC52A1Q9NWF4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
SLC52A1Q9NWF4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
SLC52A1Q9NWF4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC34.49■■■■□ 3.11
SLC52A1Q9NWF4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC34.48■■■■□ 3.11
SLC52A1Q9NWF4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC34.47■■■■□ 3.11
SLC52A1Q9NWF4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
SLC52A1Q9NWF4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
SLC52A1Q9NWF4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms