Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC133552.2-201ENST00000619106 1032 ntBASIC24.09■■□□□ 1.45
LRRC40Q9H9A6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
LRRC40Q9H9A6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
LRRC40Q9H9A6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
LRRC40Q9H9A6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.09■■□□□ 1.45
LRRC40Q9H9A6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
LRRC40Q9H9A6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
LRRC40Q9H9A6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
LRRC40Q9H9A6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
LRRC40Q9H9A6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
LRRC40Q9H9A6 KRT18P10-201ENST00000388836 1287 ntBASIC24.08■■□□□ 1.45
LRRC40Q9H9A6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
LRRC40Q9H9A6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
LRRC40Q9H9A6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
LRRC40Q9H9A6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LRRC40Q9H9A6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LRRC40Q9H9A6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
LRRC40Q9H9A6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
LRRC40Q9H9A6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
LRRC40Q9H9A6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
LRRC40Q9H9A6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
LRRC40Q9H9A6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
LRRC40Q9H9A6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.06■■□□□ 1.44
LRRC40Q9H9A6 HSD17B1P1-201ENST00000590052 955 ntBASIC24.06■■□□□ 1.44
LRRC40Q9H9A6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.06■■□□□ 1.44
LRRC40Q9H9A6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
LRRC40Q9H9A6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
LRRC40Q9H9A6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
LRRC40Q9H9A6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.06■■□□□ 1.44
LRRC40Q9H9A6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC40Q9H9A6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.05■■□□□ 1.44
LRRC40Q9H9A6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
LRRC40Q9H9A6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC40Q9H9A6 AC093323.1-202ENST00000635031 2045 ntBASIC24.05■■□□□ 1.44
LRRC40Q9H9A6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC40Q9H9A6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC40Q9H9A6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC40Q9H9A6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
LRRC40Q9H9A6 RARRES2P2-201ENST00000394842 485 ntBASIC24.04■■□□□ 1.44
LRRC40Q9H9A6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.04■■□□□ 1.44
LRRC40Q9H9A6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRRC40Q9H9A6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
LRRC40Q9H9A6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.03■■□□□ 1.44
LRRC40Q9H9A6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LRRC40Q9H9A6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
LRRC40Q9H9A6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LRRC40Q9H9A6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
LRRC40Q9H9A6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LRRC40Q9H9A6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LRRC40Q9H9A6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LRRC40Q9H9A6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LRRC40Q9H9A6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRRC40Q9H9A6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.02■■□□□ 1.44
LRRC40Q9H9A6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
LRRC40Q9H9A6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.02■■□□□ 1.44
LRRC40Q9H9A6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LRRC40Q9H9A6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LRRC40Q9H9A6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
LRRC40Q9H9A6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
LRRC40Q9H9A6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.01■■□□□ 1.43
LRRC40Q9H9A6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LRRC40Q9H9A6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LRRC40Q9H9A6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LRRC40Q9H9A6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LRRC40Q9H9A6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
LRRC40Q9H9A6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
LRRC40Q9H9A6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24■■□□□ 1.43
LRRC40Q9H9A6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24■■□□□ 1.43
LRRC40Q9H9A6 AP003733.4-201ENST00000623785 1697 ntBASIC24■■□□□ 1.43
LRRC40Q9H9A6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24■■□□□ 1.43
LRRC40Q9H9A6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24■■□□□ 1.43
LRRC40Q9H9A6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24■■□□□ 1.43
LRRC40Q9H9A6 AL139125.2-201ENST00000623134 1869 ntBASIC23.99■■□□□ 1.43
LRRC40Q9H9A6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
LRRC40Q9H9A6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LRRC40Q9H9A6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.99■■□□□ 1.43
LRRC40Q9H9A6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LRRC40Q9H9A6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
LRRC40Q9H9A6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRRC40Q9H9A6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
LRRC40Q9H9A6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
LRRC40Q9H9A6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
LRRC40Q9H9A6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
LRRC40Q9H9A6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
LRRC40Q9H9A6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRRC40Q9H9A6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
LRRC40Q9H9A6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
LRRC40Q9H9A6 AL592293.1-201ENST00000502889 1188 ntBASIC23.97■■□□□ 1.43
LRRC40Q9H9A6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
LRRC40Q9H9A6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
LRRC40Q9H9A6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.96■■□□□ 1.43
LRRC40Q9H9A6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
LRRC40Q9H9A6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
LRRC40Q9H9A6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
LRRC40Q9H9A6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LRRC40Q9H9A6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
LRRC40Q9H9A6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.95■■□□□ 1.42
LRRC40Q9H9A6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.95■■□□□ 1.42
LRRC40Q9H9A6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
LRRC40Q9H9A6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms