Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAX2Q96IS3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RAX2Q96IS3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAX2Q96IS3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAX2Q96IS3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.39■□□□□ 0.53
RAX2Q96IS3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.38■□□□□ 0.53
RAX2Q96IS3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAX2Q96IS3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAX2Q96IS3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAX2Q96IS3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.38■□□□□ 0.53
RAX2Q96IS3 AC022616.5-201ENST00000518796 181 ntBASIC18.38■□□□□ 0.53
RAX2Q96IS3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAX2Q96IS3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAX2Q96IS3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAX2Q96IS3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.38■□□□□ 0.53
RAX2Q96IS3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAX2Q96IS3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RAX2Q96IS3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RAX2Q96IS3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAX2Q96IS3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAX2Q96IS3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAX2Q96IS3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RAX2Q96IS3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RAX2Q96IS3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAX2Q96IS3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAX2Q96IS3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RAX2Q96IS3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.37■□□□□ 0.53
RAX2Q96IS3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RAX2Q96IS3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAX2Q96IS3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAX2Q96IS3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAX2Q96IS3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RAX2Q96IS3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RAX2Q96IS3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
RAX2Q96IS3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAX2Q96IS3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.37■□□□□ 0.53
RAX2Q96IS3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAX2Q96IS3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAX2Q96IS3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAX2Q96IS3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RAX2Q96IS3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAX2Q96IS3 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.36■□□□□ 0.53
RAX2Q96IS3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RAX2Q96IS3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.36■□□□□ 0.53
RAX2Q96IS3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAX2Q96IS3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RAX2Q96IS3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RAX2Q96IS3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAX2Q96IS3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RAX2Q96IS3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAX2Q96IS3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RAX2Q96IS3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAX2Q96IS3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAX2Q96IS3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAX2Q96IS3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.35■□□□□ 0.53
RAX2Q96IS3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.35■□□□□ 0.53
RAX2Q96IS3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.35■□□□□ 0.53
RAX2Q96IS3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAX2Q96IS3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
RAX2Q96IS3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAX2Q96IS3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAX2Q96IS3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAX2Q96IS3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAX2Q96IS3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RAX2Q96IS3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.34■□□□□ 0.53
RAX2Q96IS3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAX2Q96IS3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.34■□□□□ 0.53
RAX2Q96IS3 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.34■□□□□ 0.53
RAX2Q96IS3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.34■□□□□ 0.53
RAX2Q96IS3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RAX2Q96IS3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.34■□□□□ 0.53
RAX2Q96IS3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAX2Q96IS3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RAX2Q96IS3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RAX2Q96IS3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAX2Q96IS3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAX2Q96IS3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAX2Q96IS3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
RAX2Q96IS3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAX2Q96IS3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAX2Q96IS3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RAX2Q96IS3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RAX2Q96IS3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RAX2Q96IS3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAX2Q96IS3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAX2Q96IS3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.31■□□□□ 0.52
RAX2Q96IS3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAX2Q96IS3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.31■□□□□ 0.52
RAX2Q96IS3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
RAX2Q96IS3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.31■□□□□ 0.52
RAX2Q96IS3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAX2Q96IS3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.3■□□□□ 0.52
RAX2Q96IS3 KRT18P24-201ENST00000344739 1156 ntBASIC18.3■□□□□ 0.52
RAX2Q96IS3 GUSBP5-201ENST00000418136 578 ntBASIC18.3■□□□□ 0.52
RAX2Q96IS3 AC239859.2-201ENST00000444165 318 ntBASIC18.3■□□□□ 0.52
RAX2Q96IS3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.3■□□□□ 0.52
RAX2Q96IS3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.3■□□□□ 0.52
RAX2Q96IS3 THA1P-201ENST00000590384 1145 ntBASIC18.3■□□□□ 0.52
RAX2Q96IS3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RAX2Q96IS3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms