Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TRIM11Q96F44 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRIM11Q96F44 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
TRIM11Q96F44 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
TRIM11Q96F44 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.1■■□□□ 1.61
TRIM11Q96F44 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.1■■□□□ 1.61
TRIM11Q96F44 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
TRIM11Q96F44 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
TRIM11Q96F44 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TRIM11Q96F44 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRIM11Q96F44 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM11Q96F44 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM11Q96F44 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM11Q96F44 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM11Q96F44 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM11Q96F44 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM11Q96F44 RNF126P1-201ENST00000567452 1320 ntBASIC25.09■■□□□ 1.61
TRIM11Q96F44 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM11Q96F44 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM11Q96F44 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM11Q96F44 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TRIM11Q96F44 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.08■■□□□ 1.61
TRIM11Q96F44 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TRIM11Q96F44 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TRIM11Q96F44 AL139125.2-201ENST00000623134 1869 ntBASIC25.08■■□□□ 1.61
TRIM11Q96F44 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.6
TRIM11Q96F44 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.08■■□□□ 1.6
TRIM11Q96F44 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TRIM11Q96F44 AC093323.1-202ENST00000635031 2045 ntBASIC25.07■■□□□ 1.6
TRIM11Q96F44 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.07■■□□□ 1.6
TRIM11Q96F44 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TRIM11Q96F44 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.06■■□□□ 1.6
TRIM11Q96F44 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM11Q96F44 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM11Q96F44 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM11Q96F44 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM11Q96F44 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM11Q96F44 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.05■■□□□ 1.6
TRIM11Q96F44 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM11Q96F44 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
TRIM11Q96F44 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.05■■□□□ 1.6
TRIM11Q96F44 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM11Q96F44 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM11Q96F44 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.04■■□□□ 1.6
TRIM11Q96F44 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.04■■□□□ 1.6
TRIM11Q96F44 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM11Q96F44 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM11Q96F44 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM11Q96F44 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM11Q96F44 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
TRIM11Q96F44 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM11Q96F44 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM11Q96F44 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM11Q96F44 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM11Q96F44 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TRIM11Q96F44 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.02■■□□□ 1.6
TRIM11Q96F44 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TRIM11Q96F44 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TRIM11Q96F44 AC009831.1-201ENST00000580420 1582 ntBASIC25.01■■□□□ 1.59
TRIM11Q96F44 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TRIM11Q96F44 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
TRIM11Q96F44 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.01■■□□□ 1.59
TRIM11Q96F44 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TRIM11Q96F44 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
TRIM11Q96F44 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25■■□□□ 1.59
TRIM11Q96F44 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25■■□□□ 1.59
TRIM11Q96F44 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TRIM11Q96F44 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
TRIM11Q96F44 AC133552.2-201ENST00000619106 1032 ntBASIC25■■□□□ 1.59
TRIM11Q96F44 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TRIM11Q96F44 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25■■□□□ 1.59
TRIM11Q96F44 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.99■■□□□ 1.59
TRIM11Q96F44 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
TRIM11Q96F44 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TRIM11Q96F44 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.99■■□□□ 1.59
TRIM11Q96F44 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TRIM11Q96F44 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.99■■□□□ 1.59
TRIM11Q96F44 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.99■■□□□ 1.59
TRIM11Q96F44 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.99■■□□□ 1.59
TRIM11Q96F44 MIR6089-201ENST00000616698 64 ntBASIC24.99■■□□□ 1.59
TRIM11Q96F44 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.99■■□□□ 1.59
TRIM11Q96F44 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TRIM11Q96F44 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.98■■□□□ 1.59
TRIM11Q96F44 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.98■■□□□ 1.59
TRIM11Q96F44 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM11Q96F44 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.98■■□□□ 1.59
TRIM11Q96F44 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.98■■□□□ 1.59
TRIM11Q96F44 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM11Q96F44 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM11Q96F44 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
TRIM11Q96F44 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM11Q96F44 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM11Q96F44 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.97■■□□□ 1.59
TRIM11Q96F44 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM11Q96F44 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.97■■□□□ 1.59
TRIM11Q96F44 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM11Q96F44 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM11Q96F44 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM11Q96F44 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TRIM11Q96F44 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms