Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.31■■□□□ 1
PTP4A1Q93096 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.31■■□□□ 1
PTP4A1Q93096 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTP4A1Q93096 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTP4A1Q93096 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTP4A1Q93096 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.31■■□□□ 1
PTP4A1Q93096 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTP4A1Q93096 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTP4A1Q93096 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTP4A1Q93096 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTP4A1Q93096 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PTP4A1Q93096 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTP4A1Q93096 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PTP4A1Q93096 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PTP4A1Q93096 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.29■■□□□ 1
PTP4A1Q93096 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTP4A1Q93096 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTP4A1Q93096 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.29■■□□□ 1
PTP4A1Q93096 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.29■■□□□ 1
PTP4A1Q93096 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTP4A1Q93096 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.29■■□□□ 1
PTP4A1Q93096 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.29■■□□□ 1
PTP4A1Q93096 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTP4A1Q93096 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
PTP4A1Q93096 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PTP4A1Q93096 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTP4A1Q93096 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTP4A1Q93096 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTP4A1Q93096 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.28■■□□□ 1
PTP4A1Q93096 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.28■■□□□ 1
PTP4A1Q93096 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.28■■□□□ 1
PTP4A1Q93096 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PTP4A1Q93096 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
PTP4A1Q93096 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
PTP4A1Q93096 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTP4A1Q93096 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.28■■□□□ 1
PTP4A1Q93096 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTP4A1Q93096 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.27■■□□□ 1
PTP4A1Q93096 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PTP4A1Q93096 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PTP4A1Q93096 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.27■■□□□ 1
PTP4A1Q93096 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTP4A1Q93096 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTP4A1Q93096 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PTP4A1Q93096 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PTP4A1Q93096 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PTP4A1Q93096 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.26■□□□□ 0.99
PTP4A1Q93096 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTP4A1Q93096 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.26■□□□□ 0.99
PTP4A1Q93096 AL157400.5-201ENST00000507624 621 ntBASIC21.26■□□□□ 0.99
PTP4A1Q93096 AC025884.2-201ENST00000553429 711 ntBASIC21.26■□□□□ 0.99
PTP4A1Q93096 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.26■□□□□ 0.99
PTP4A1Q93096 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.26■□□□□ 0.99
PTP4A1Q93096 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.26■□□□□ 0.99
PTP4A1Q93096 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.26■□□□□ 0.99
PTP4A1Q93096 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.25■□□□□ 0.99
PTP4A1Q93096 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTP4A1Q93096 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTP4A1Q93096 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PTP4A1Q93096 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTP4A1Q93096 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PTP4A1Q93096 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PTP4A1Q93096 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTP4A1Q93096 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTP4A1Q93096 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTP4A1Q93096 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.24■□□□□ 0.99
PTP4A1Q93096 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTP4A1Q93096 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PTP4A1Q93096 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PTP4A1Q93096 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTP4A1Q93096 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTP4A1Q93096 LINC00543-201ENST00000567234 1845 ntBASIC21.23■□□□□ 0.99
PTP4A1Q93096 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.23■□□□□ 0.99
PTP4A1Q93096 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.23■□□□□ 0.99
PTP4A1Q93096 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PTP4A1Q93096 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTP4A1Q93096 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTP4A1Q93096 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PTP4A1Q93096 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTP4A1Q93096 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTP4A1Q93096 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.22■□□□□ 0.99
PTP4A1Q93096 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTP4A1Q93096 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
PTP4A1Q93096 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTP4A1Q93096 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTP4A1Q93096 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.21■□□□□ 0.99
PTP4A1Q93096 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTP4A1Q93096 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTP4A1Q93096 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PTP4A1Q93096 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.21■□□□□ 0.99
PTP4A1Q93096 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTP4A1Q93096 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTP4A1Q93096 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.21■□□□□ 0.99
PTP4A1Q93096 AC022413.1-201ENST00000624602 984 ntBASIC21.21■□□□□ 0.99
PTP4A1Q93096 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTP4A1Q93096 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.2■□□□□ 0.98
PTP4A1Q93096 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTP4A1Q93096 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.2■□□□□ 0.98
PTP4A1Q93096 AC060814.1-201ENST00000554326 538 ntBASIC21.2■□□□□ 0.98
PTP4A1Q93096 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms