Protein–RNA interactions for Protein: Q8NG66

NEK11, Serine/threonine-protein kinase Nek11, humanhuman

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11Q8NG66 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.9■■□□□ 1.74
NEK11Q8NG66 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
NEK11Q8NG66 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
NEK11Q8NG66 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
NEK11Q8NG66 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.89■■□□□ 1.74
NEK11Q8NG66 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
NEK11Q8NG66 MIR639-201ENST00000384974 98 ntBASIC25.89■■□□□ 1.74
NEK11Q8NG66 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
NEK11Q8NG66 SMPD5-203ENST00000639008 1464 ntBASIC25.89■■□□□ 1.73
NEK11Q8NG66 AL139125.2-201ENST00000623134 1869 ntBASIC25.89■■□□□ 1.73
NEK11Q8NG66 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
NEK11Q8NG66 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
NEK11Q8NG66 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NEK11Q8NG66 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NEK11Q8NG66 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NEK11Q8NG66 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
NEK11Q8NG66 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.88■■□□□ 1.73
NEK11Q8NG66 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NEK11Q8NG66 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NEK11Q8NG66 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.88■■□□□ 1.73
NEK11Q8NG66 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NEK11Q8NG66 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.87■■□□□ 1.73
NEK11Q8NG66 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NEK11Q8NG66 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.87■■□□□ 1.73
NEK11Q8NG66 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NEK11Q8NG66 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NEK11Q8NG66 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NEK11Q8NG66 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
NEK11Q8NG66 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
NEK11Q8NG66 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
NEK11Q8NG66 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NEK11Q8NG66 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NEK11Q8NG66 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NEK11Q8NG66 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
NEK11Q8NG66 AC092296.2-201ENST00000589470 999 ntBASIC25.85■■□□□ 1.73
NEK11Q8NG66 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
NEK11Q8NG66 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.84■■□□□ 1.73
NEK11Q8NG66 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
NEK11Q8NG66 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
NEK11Q8NG66 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
NEK11Q8NG66 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
NEK11Q8NG66 SLC6A10P-202ENST00000431994 2058 ntBASIC25.84■■□□□ 1.73
NEK11Q8NG66 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
NEK11Q8NG66 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NEK11Q8NG66 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.83■■□□□ 1.73
NEK11Q8NG66 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
NEK11Q8NG66 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.82■■□□□ 1.72
NEK11Q8NG66 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
NEK11Q8NG66 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
NEK11Q8NG66 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
NEK11Q8NG66 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.82■■□□□ 1.72
NEK11Q8NG66 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
NEK11Q8NG66 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
NEK11Q8NG66 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
NEK11Q8NG66 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NEK11Q8NG66 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.81■■□□□ 1.72
NEK11Q8NG66 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
NEK11Q8NG66 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.81■■□□□ 1.72
NEK11Q8NG66 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
NEK11Q8NG66 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NEK11Q8NG66 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
NEK11Q8NG66 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.81■■□□□ 1.72
NEK11Q8NG66 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NEK11Q8NG66 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
NEK11Q8NG66 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
NEK11Q8NG66 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NEK11Q8NG66 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NEK11Q8NG66 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
NEK11Q8NG66 AC022413.1-201ENST00000624602 984 ntBASIC25.8■■□□□ 1.72
NEK11Q8NG66 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NEK11Q8NG66 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NEK11Q8NG66 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NEK11Q8NG66 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NEK11Q8NG66 ECEL1P2-201ENST00000461596 1295 ntBASIC25.79■■□□□ 1.72
NEK11Q8NG66 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.79■■□□□ 1.72
NEK11Q8NG66 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.79■■□□□ 1.72
NEK11Q8NG66 AP003733.4-201ENST00000623785 1697 ntBASIC25.79■■□□□ 1.72
NEK11Q8NG66 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
NEK11Q8NG66 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
NEK11Q8NG66 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.79■■□□□ 1.72
NEK11Q8NG66 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NEK11Q8NG66 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.78■■□□□ 1.72
NEK11Q8NG66 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NEK11Q8NG66 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
NEK11Q8NG66 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.78■■□□□ 1.72
NEK11Q8NG66 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NEK11Q8NG66 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NEK11Q8NG66 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NEK11Q8NG66 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.77■■□□□ 1.72
NEK11Q8NG66 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
NEK11Q8NG66 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
NEK11Q8NG66 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
NEK11Q8NG66 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC25.77■■□□□ 1.72
NEK11Q8NG66 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
NEK11Q8NG66 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
NEK11Q8NG66 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.77■■□□□ 1.72
NEK11Q8NG66 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NEK11Q8NG66 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
NEK11Q8NG66 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NEK11Q8NG66 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms