Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 AC060814.1-201ENST00000554326 538 ntBASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 MIR3960-201ENST00000583311 91 ntBASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 SLC6A10P-202ENST00000431994 2058 ntBASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 AC022413.1-201ENST00000624602 984 ntBASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM116Q8NCL8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM116Q8NCL8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM116Q8NCL8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM116Q8NCL8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEM116Q8NCL8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM116Q8NCL8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 SMPD5-203ENST00000639008 1464 ntBASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM116Q8NCL8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM116Q8NCL8 AC092296.2-201ENST00000589470 999 ntBASIC18.59■□□□□ 0.57
TMEM116Q8NCL8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM116Q8NCL8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM116Q8NCL8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM116Q8NCL8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM116Q8NCL8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM116Q8NCL8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.58■□□□□ 0.57
TMEM116Q8NCL8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.58■□□□□ 0.57
TMEM116Q8NCL8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM116Q8NCL8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM116Q8NCL8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM116Q8NCL8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM116Q8NCL8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM116Q8NCL8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM116Q8NCL8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM116Q8NCL8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM116Q8NCL8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEM116Q8NCL8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.56■□□□□ 0.56
TMEM116Q8NCL8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms