Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 AC060814.1-201ENST00000554326 538 ntBASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 MIR3960-201ENST00000583311 91 ntBASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 SLC6A10P-202ENST00000431994 2058 ntBASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEM116Q8NCL8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 AC022413.1-201ENST00000624602 984 ntBASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TMEM116Q8NCL8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM116Q8NCL8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM116Q8NCL8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM116Q8NCL8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM116Q8NCL8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM116Q8NCL8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM116Q8NCL8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEM116Q8NCL8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM116Q8NCL8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 SMPD5-203ENST00000639008 1464 ntBASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM116Q8NCL8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM116Q8NCL8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM116Q8NCL8 AC092296.2-201ENST00000589470 999 ntBASIC18.59■□□□□ 0.57
TMEM116Q8NCL8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM116Q8NCL8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM116Q8NCL8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM116Q8NCL8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM116Q8NCL8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM116Q8NCL8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.58■□□□□ 0.57
TMEM116Q8NCL8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.58■□□□□ 0.57
TMEM116Q8NCL8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM116Q8NCL8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM116Q8NCL8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM116Q8NCL8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM116Q8NCL8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM116Q8NCL8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM116Q8NCL8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM116Q8NCL8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM116Q8NCL8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TMEM116Q8NCL8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEM116Q8NCL8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.56■□□□□ 0.56
TMEM116Q8NCL8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms