Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CNEP1R1Q8N9A8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNEP1R1Q8N9A8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNEP1R1Q8N9A8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNEP1R1Q8N9A8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.1■□□□□ 0.97
CNEP1R1Q8N9A8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CNEP1R1Q8N9A8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNEP1R1Q8N9A8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNEP1R1Q8N9A8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CNEP1R1Q8N9A8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
CNEP1R1Q8N9A8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.09■□□□□ 0.97
CNEP1R1Q8N9A8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CNEP1R1Q8N9A8 THA1P-201ENST00000590384 1145 ntBASIC21.09■□□□□ 0.97
CNEP1R1Q8N9A8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.09■□□□□ 0.97
CNEP1R1Q8N9A8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CNEP1R1Q8N9A8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNEP1R1Q8N9A8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNEP1R1Q8N9A8 ERN1-208ENST00000606895 2068 ntBASIC21.08■□□□□ 0.97
CNEP1R1Q8N9A8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CNEP1R1Q8N9A8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNEP1R1Q8N9A8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNEP1R1Q8N9A8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNEP1R1Q8N9A8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNEP1R1Q8N9A8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNEP1R1Q8N9A8 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.08■□□□□ 0.97
CNEP1R1Q8N9A8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNEP1R1Q8N9A8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.08■□□□□ 0.96
CNEP1R1Q8N9A8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNEP1R1Q8N9A8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNEP1R1Q8N9A8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNEP1R1Q8N9A8 AL592295.1-201ENST00000400984 884 ntBASIC21.07■□□□□ 0.96
CNEP1R1Q8N9A8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNEP1R1Q8N9A8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNEP1R1Q8N9A8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNEP1R1Q8N9A8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNEP1R1Q8N9A8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNEP1R1Q8N9A8 AC239859.2-201ENST00000444165 318 ntBASIC21.06■□□□□ 0.96
CNEP1R1Q8N9A8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNEP1R1Q8N9A8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNEP1R1Q8N9A8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNEP1R1Q8N9A8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.05■□□□□ 0.96
CNEP1R1Q8N9A8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNEP1R1Q8N9A8 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.05■□□□□ 0.96
CNEP1R1Q8N9A8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNEP1R1Q8N9A8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CNEP1R1Q8N9A8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNEP1R1Q8N9A8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNEP1R1Q8N9A8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.04■□□□□ 0.96
CNEP1R1Q8N9A8 KRT18P24-201ENST00000344739 1156 ntBASIC21.04■□□□□ 0.96
CNEP1R1Q8N9A8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.04■□□□□ 0.96
CNEP1R1Q8N9A8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.04■□□□□ 0.96
CNEP1R1Q8N9A8 AC120024.1-201ENST00000562672 995 ntBASIC21.04■□□□□ 0.96
CNEP1R1Q8N9A8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.04■□□□□ 0.96
CNEP1R1Q8N9A8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNEP1R1Q8N9A8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.04■□□□□ 0.96
CNEP1R1Q8N9A8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNEP1R1Q8N9A8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.04■□□□□ 0.96
CNEP1R1Q8N9A8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNEP1R1Q8N9A8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNEP1R1Q8N9A8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNEP1R1Q8N9A8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.03■□□□□ 0.96
CNEP1R1Q8N9A8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.03■□□□□ 0.96
CNEP1R1Q8N9A8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.03■□□□□ 0.96
CNEP1R1Q8N9A8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.03■□□□□ 0.96
CNEP1R1Q8N9A8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNEP1R1Q8N9A8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CNEP1R1Q8N9A8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNEP1R1Q8N9A8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNEP1R1Q8N9A8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.01■□□□□ 0.95
CNEP1R1Q8N9A8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNEP1R1Q8N9A8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNEP1R1Q8N9A8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CNEP1R1Q8N9A8 GUSBP5-201ENST00000418136 578 ntBASIC21.01■□□□□ 0.95
CNEP1R1Q8N9A8 BX664725.1-201ENST00000438252 379 ntBASIC21.01■□□□□ 0.95
CNEP1R1Q8N9A8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CNEP1R1Q8N9A8 KRT125P-201ENST00000546827 989 ntBASIC21.01■□□□□ 0.95
CNEP1R1Q8N9A8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNEP1R1Q8N9A8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
CNEP1R1Q8N9A8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNEP1R1Q8N9A8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21■□□□□ 0.95
CNEP1R1Q8N9A8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CNEP1R1Q8N9A8 Z92544.1-202ENST00000571933 1220 ntBASIC21■□□□□ 0.95
CNEP1R1Q8N9A8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNEP1R1Q8N9A8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21■□□□□ 0.95
CNEP1R1Q8N9A8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21■□□□□ 0.95
CNEP1R1Q8N9A8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNEP1R1Q8N9A8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CNEP1R1Q8N9A8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
CNEP1R1Q8N9A8 AC096887.2-201ENST00000623443 1957 ntBASIC20.99■□□□□ 0.95
CNEP1R1Q8N9A8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.99■□□□□ 0.95
CNEP1R1Q8N9A8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CNEP1R1Q8N9A8 AC092803.2-201ENST00000564287 1899 ntBASIC20.99■□□□□ 0.95
CNEP1R1Q8N9A8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNEP1R1Q8N9A8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNEP1R1Q8N9A8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNEP1R1Q8N9A8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNEP1R1Q8N9A8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNEP1R1Q8N9A8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
CNEP1R1Q8N9A8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNEP1R1Q8N9A8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms