Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.31■■□□□ 1.32
CCNYL1Q8N7R7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CCNYL1Q8N7R7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.31■■□□□ 1.32
CCNYL1Q8N7R7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.31■■□□□ 1.32
CCNYL1Q8N7R7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CCNYL1Q8N7R7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.31■■□□□ 1.32
CCNYL1Q8N7R7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CCNYL1Q8N7R7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
CCNYL1Q8N7R7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCNYL1Q8N7R7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
CCNYL1Q8N7R7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNYL1Q8N7R7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNYL1Q8N7R7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNYL1Q8N7R7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNYL1Q8N7R7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
CCNYL1Q8N7R7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNYL1Q8N7R7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNYL1Q8N7R7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CCNYL1Q8N7R7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNYL1Q8N7R7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CCNYL1Q8N7R7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNYL1Q8N7R7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNYL1Q8N7R7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNYL1Q8N7R7 AL157400.5-201ENST00000507624 621 ntBASIC23.29■■□□□ 1.32
CCNYL1Q8N7R7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CCNYL1Q8N7R7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNYL1Q8N7R7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.29■■□□□ 1.32
CCNYL1Q8N7R7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNYL1Q8N7R7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCNYL1Q8N7R7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNYL1Q8N7R7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNYL1Q8N7R7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCNYL1Q8N7R7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNYL1Q8N7R7 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.28■■□□□ 1.32
CCNYL1Q8N7R7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNYL1Q8N7R7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.28■■□□□ 1.32
CCNYL1Q8N7R7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.28■■□□□ 1.32
CCNYL1Q8N7R7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCNYL1Q8N7R7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCNYL1Q8N7R7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNYL1Q8N7R7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNYL1Q8N7R7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNYL1Q8N7R7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNYL1Q8N7R7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.27■■□□□ 1.32
CCNYL1Q8N7R7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCNYL1Q8N7R7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.27■■□□□ 1.32
CCNYL1Q8N7R7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.27■■□□□ 1.32
CCNYL1Q8N7R7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNYL1Q8N7R7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNYL1Q8N7R7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCNYL1Q8N7R7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCNYL1Q8N7R7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNYL1Q8N7R7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNYL1Q8N7R7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNYL1Q8N7R7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.26■■□□□ 1.31
CCNYL1Q8N7R7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
CCNYL1Q8N7R7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNYL1Q8N7R7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNYL1Q8N7R7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNYL1Q8N7R7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CCNYL1Q8N7R7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCNYL1Q8N7R7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNYL1Q8N7R7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNYL1Q8N7R7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.25■■□□□ 1.31
CCNYL1Q8N7R7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCNYL1Q8N7R7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.24■■□□□ 1.31
CCNYL1Q8N7R7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CCNYL1Q8N7R7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CCNYL1Q8N7R7 AC025884.2-201ENST00000553429 711 ntBASIC23.24■■□□□ 1.31
CCNYL1Q8N7R7 AC060814.1-201ENST00000554326 538 ntBASIC23.24■■□□□ 1.31
CCNYL1Q8N7R7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCNYL1Q8N7R7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.24■■□□□ 1.31
CCNYL1Q8N7R7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCNYL1Q8N7R7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CCNYL1Q8N7R7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
CCNYL1Q8N7R7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.22■■□□□ 1.31
CCNYL1Q8N7R7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.22■■□□□ 1.31
CCNYL1Q8N7R7 MIR3960-201ENST00000583311 91 ntBASIC23.22■■□□□ 1.31
CCNYL1Q8N7R7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCNYL1Q8N7R7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCNYL1Q8N7R7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCNYL1Q8N7R7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCNYL1Q8N7R7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
CCNYL1Q8N7R7 SMPD5-203ENST00000639008 1464 ntBASIC23.21■■□□□ 1.31
CCNYL1Q8N7R7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNYL1Q8N7R7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CCNYL1Q8N7R7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CCNYL1Q8N7R7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNYL1Q8N7R7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.2■■□□□ 1.3
CCNYL1Q8N7R7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
CCNYL1Q8N7R7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CCNYL1Q8N7R7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CCNYL1Q8N7R7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.2■■□□□ 1.3
CCNYL1Q8N7R7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.2■■□□□ 1.3
CCNYL1Q8N7R7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCNYL1Q8N7R7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCNYL1Q8N7R7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNYL1Q8N7R7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCNYL1Q8N7R7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCNYL1Q8N7R7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms