Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL27A1Q8IZC6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL27A1Q8IZC6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
COL27A1Q8IZC6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.84■■□□□ 1.25
COL27A1Q8IZC6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL27A1Q8IZC6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL27A1Q8IZC6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.84■■□□□ 1.25
COL27A1Q8IZC6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL27A1Q8IZC6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.83■■□□□ 1.25
COL27A1Q8IZC6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.83■■□□□ 1.25
COL27A1Q8IZC6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL27A1Q8IZC6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
COL27A1Q8IZC6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 MIR6724-1-201ENST00000616420 92 ntBASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 MIR6724-2-201ENST00000616483 92 ntBASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 MIR6724-4-201ENST00000617390 92 ntBASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 MIR6724-3-201ENST00000622482 92 ntBASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 AP004609.3-201ENST00000610705 1884 ntBASIC22.81■■□□□ 1.24
COL27A1Q8IZC6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.81■■□□□ 1.24
COL27A1Q8IZC6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL27A1Q8IZC6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.81■■□□□ 1.24
COL27A1Q8IZC6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
COL27A1Q8IZC6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
COL27A1Q8IZC6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
COL27A1Q8IZC6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.8■■□□□ 1.24
COL27A1Q8IZC6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.8■■□□□ 1.24
COL27A1Q8IZC6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.8■■□□□ 1.24
COL27A1Q8IZC6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
COL27A1Q8IZC6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL27A1Q8IZC6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 MIR3621-201ENST00000580529 85 ntBASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 AL136116.3-201ENST00000402907 1138 ntBASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 AF131216.4-201ENST00000638924 1588 ntBASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
COL27A1Q8IZC6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
COL27A1Q8IZC6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL27A1Q8IZC6 AL139246.5-201ENST00000606645 996 ntBASIC22.77■■□□□ 1.24
COL27A1Q8IZC6 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.77■■□□□ 1.24
COL27A1Q8IZC6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL27A1Q8IZC6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL27A1Q8IZC6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.76■■□□□ 1.23
COL27A1Q8IZC6 MTDHP2-201ENST00000601468 714 ntBASIC22.76■■□□□ 1.23
COL27A1Q8IZC6 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.76■■□□□ 1.23
COL27A1Q8IZC6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL27A1Q8IZC6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.76■■□□□ 1.23
COL27A1Q8IZC6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL27A1Q8IZC6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL27A1Q8IZC6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL27A1Q8IZC6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.75■■□□□ 1.23
COL27A1Q8IZC6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.75■■□□□ 1.23
COL27A1Q8IZC6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL27A1Q8IZC6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL27A1Q8IZC6 AC010997.5-201ENST00000609182 354 ntBASIC22.75■■□□□ 1.23
COL27A1Q8IZC6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
COL27A1Q8IZC6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL27A1Q8IZC6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.74■■□□□ 1.23
COL27A1Q8IZC6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL27A1Q8IZC6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.73■■□□□ 1.23
COL27A1Q8IZC6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL27A1Q8IZC6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.73■■□□□ 1.23
COL27A1Q8IZC6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.73■■□□□ 1.23
COL27A1Q8IZC6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.73■■□□□ 1.23
COL27A1Q8IZC6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL27A1Q8IZC6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL27A1Q8IZC6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL27A1Q8IZC6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.72■■□□□ 1.23
COL27A1Q8IZC6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
COL27A1Q8IZC6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL27A1Q8IZC6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL27A1Q8IZC6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL27A1Q8IZC6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.71■■□□□ 1.23
COL27A1Q8IZC6 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.71■■□□□ 1.23
COL27A1Q8IZC6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL27A1Q8IZC6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL27A1Q8IZC6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL27A1Q8IZC6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms