Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
RP1L1Q8IWN7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
RP1L1Q8IWN7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RP1L1Q8IWN7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RP1L1Q8IWN7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.57■■□□□ 1.04
RP1L1Q8IWN7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RP1L1Q8IWN7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.57■■□□□ 1.04
RP1L1Q8IWN7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RP1L1Q8IWN7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.57■■□□□ 1.04
RP1L1Q8IWN7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
RP1L1Q8IWN7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RP1L1Q8IWN7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RP1L1Q8IWN7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.57■■□□□ 1.04
RP1L1Q8IWN7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RP1L1Q8IWN7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
RP1L1Q8IWN7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
RP1L1Q8IWN7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RP1L1Q8IWN7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RP1L1Q8IWN7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RP1L1Q8IWN7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RP1L1Q8IWN7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.55■■□□□ 1.04
RP1L1Q8IWN7 AC092666.2-201ENST00000613287 246 ntBASIC21.55■■□□□ 1.04
RP1L1Q8IWN7 AL117332.1-201ENST00000622628 974 ntBASIC21.55■■□□□ 1.04
RP1L1Q8IWN7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.55■■□□□ 1.04
RP1L1Q8IWN7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RP1L1Q8IWN7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RP1L1Q8IWN7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.55■■□□□ 1.04
RP1L1Q8IWN7 RARRES2P6-201ENST00000567333 442 ntBASIC21.55■■□□□ 1.04
RP1L1Q8IWN7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RP1L1Q8IWN7 AC010997.5-201ENST00000609182 354 ntBASIC21.54■■□□□ 1.04
RP1L1Q8IWN7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RP1L1Q8IWN7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RP1L1Q8IWN7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.54■■□□□ 1.04
RP1L1Q8IWN7 MIR6724-1-201ENST00000616420 92 ntBASIC21.54■■□□□ 1.04
RP1L1Q8IWN7 MIR6724-2-201ENST00000616483 92 ntBASIC21.54■■□□□ 1.04
RP1L1Q8IWN7 MIR6724-4-201ENST00000617390 92 ntBASIC21.54■■□□□ 1.04
RP1L1Q8IWN7 MIR6724-3-201ENST00000622482 92 ntBASIC21.54■■□□□ 1.04
RP1L1Q8IWN7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RP1L1Q8IWN7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.53■■□□□ 1.04
RP1L1Q8IWN7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.53■■□□□ 1.04
RP1L1Q8IWN7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RP1L1Q8IWN7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RP1L1Q8IWN7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.52■■□□□ 1.04
RP1L1Q8IWN7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.52■■□□□ 1.04
RP1L1Q8IWN7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.52■■□□□ 1.04
RP1L1Q8IWN7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.51■■□□□ 1.03
RP1L1Q8IWN7 AL512631.2-201ENST00000604634 923 ntBASIC21.51■■□□□ 1.03
RP1L1Q8IWN7 AC106739.1-201ENST00000617035 715 ntBASIC21.51■■□□□ 1.03
RP1L1Q8IWN7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.51■■□□□ 1.03
RP1L1Q8IWN7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RP1L1Q8IWN7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RP1L1Q8IWN7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
RP1L1Q8IWN7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RP1L1Q8IWN7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RP1L1Q8IWN7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.5■■□□□ 1.03
RP1L1Q8IWN7 MIR5787-201ENST00000611784 55 ntBASIC21.5■■□□□ 1.03
RP1L1Q8IWN7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RP1L1Q8IWN7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RP1L1Q8IWN7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.5■■□□□ 1.03
RP1L1Q8IWN7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RP1L1Q8IWN7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RP1L1Q8IWN7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.49■■□□□ 1.03
RP1L1Q8IWN7 AC104564.3-201ENST00000582367 638 ntBASIC21.49■■□□□ 1.03
RP1L1Q8IWN7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RP1L1Q8IWN7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
RP1L1Q8IWN7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.49■■□□□ 1.03
RP1L1Q8IWN7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RP1L1Q8IWN7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.49■■□□□ 1.03
RP1L1Q8IWN7 MTDHP2-201ENST00000601468 714 ntBASIC21.48■■□□□ 1.03
RP1L1Q8IWN7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
RP1L1Q8IWN7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RP1L1Q8IWN7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RP1L1Q8IWN7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RP1L1Q8IWN7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RP1L1Q8IWN7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RP1L1Q8IWN7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.48■■□□□ 1.03
RP1L1Q8IWN7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RP1L1Q8IWN7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RP1L1Q8IWN7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RP1L1Q8IWN7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RP1L1Q8IWN7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RP1L1Q8IWN7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RP1L1Q8IWN7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RP1L1Q8IWN7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RP1L1Q8IWN7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RP1L1Q8IWN7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RP1L1Q8IWN7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RP1L1Q8IWN7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.46■■□□□ 1.03
RP1L1Q8IWN7 AC142381.2-201ENST00000566120 298 ntBASIC21.46■■□□□ 1.03
RP1L1Q8IWN7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.46■■□□□ 1.03
RP1L1Q8IWN7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.45■■□□□ 1.02
RP1L1Q8IWN7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RP1L1Q8IWN7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RP1L1Q8IWN7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RP1L1Q8IWN7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.45■■□□□ 1.02
RP1L1Q8IWN7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RP1L1Q8IWN7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RP1L1Q8IWN7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.44■■□□□ 1.02
RP1L1Q8IWN7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RP1L1Q8IWN7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms